RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 BAXQ07812 192 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 HES1Q14469 280 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 FAM74A1Q5RGS3 127 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 UQCC3Q6UW78 93 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 ZNF788Q6ZQV5 615 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 EIF4E3Q8N5X7 224 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 OR2C3Q8N628 320 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 CD177Q8N6Q3 437 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 UBAC2Q8NBM4 344 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 OR52L2PQ8NGH6 319 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 OR13D1Q8NGV5 346 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 TCTEX1D2Q8WW35 142 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 SAT2Q96F10 170 aaPredicted RBP5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 HSD17B10Q99714 261 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 TOLLIPQ9H0E2 274 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 CACFD1Q9UGQ2 172 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 PRELID3BQ9Y3B1 194 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 LPAP08519 4548 aa5.5□□□□□ -1.53
EXOSC3-206ENST00000489414 RAB19A4D1S5 217 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 ZNF729A6NN14 1252 aaPredicted RBP5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 FAM90A26D6RGX4 464 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 SIGLEC5O15389 551 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 FGF16O43320 207 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 YPEL1O60688 119 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 PITX3O75364 302 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 ZNF737O75373 536 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 DFFBO76075 338 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 SEC11BP0C7V7 166 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 CCL3L1P16619 93 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 PPP1CCP36873 323 aaKnown RBP5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 KIR2DS2P43631 304 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 LPAR6P43657 344 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 RAB5CP51148 216 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 ERVK-16P61578 105 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 POLR2GP62487 172 aaKnown RBP eCLIP5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 HBG1P69891 147 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 HBG2P69892 147 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 ID3Q02535 119 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 ICAM4Q14773 271 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 DEFB135Q30KP9 77 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 RPL7L1Q6DKI1 246 aaKnown RBP5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 SLC25A24Q6NUK1 477 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 C6orf223Q8N319 242 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 OR1S2Q8NGQ3 325 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 OR13A1Q8NGR1 328 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 RFESDQ8TAC1 157 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 MARC2Q969Z3 335 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 SDSLQ96GA7 329 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 NARS2Q96I59 477 aaKnown RBP5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 YPEL2Q96QA6 119 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 CLCC1Q96S66 551 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 SMIM3Q9BZL3 60 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 CYTL1Q9NRR1 136 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 LYRM2Q9NU23 88 aaPredicted RBP5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 CACNG5Q9UF02 275 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 RNF150Q9ULK6 438 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 PSG11Q9UQ72 335 aa5.49□□□□□ -1.53
EXOSC3-206ENST00000489414 IGHV4OR15-8A0A075B7B6 117 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 A0A087WW49 117 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 A0A1W2PPH5 198 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 A0A1W2PPI3 338 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 hADV38S2A0JD32 116 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 C15orf65H3BRN8 121 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 TOR1AO14656 332 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 ITGB1BP1O14713 200 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 SYNGR2O43760 224 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 IFNA10P01566 189 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 IFNA5P01569 189 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 AMBPP02760 352 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 PRH1P02810 166 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 TFF1P04155 84 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 FGF2P09038 288 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 SSTR5P35346 364 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 SULT1A2P50226 295 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 TAS2R30P59541 319 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 LTC4SQ16873 150 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 Q3ZCU0 254 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 TMEM200BQ69YZ2 307 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 IL34Q6ZMJ4 242 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 H2BFWTQ7Z2G1 175 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 SPAG16Q8N0X2 631 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 TPRX1Q8N7U7 411 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 ZNRF1Q8ND25 227 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 DMBX1Q8NFW5 382 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 GPR146Q96CH1 333 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 GNPNAT1Q96EK6 184 aaPredicted RBP5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 CIB3Q96Q77 187 aaPredicted RBP5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 GPHA2Q96T91 129 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 MAGT1Q9H0U3 335 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 KLK15Q9H2R5 256 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 GAL3ST2Q9H3Q3 398 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 COA4Q9NYJ1 87 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 CALYQ9NYX4 217 aa5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 STRAPQ9Y3F4 350 aaKnown RBP5.48□□□□□ -1.53
EXOSC3-206ENST00000489414 LOC102724200A0A096LPH7 203 aaPredicted RBP5.47□□□□□ -1.53
EXOSC3-206ENST00000489414 IGHV3-43A0A0B4J1X8 118 aa5.47□□□□□ -1.53
EXOSC3-206ENST00000489414 KBTBD11-OT1A0A1B0GTJ5 212 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms