RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 C5orf24Q7Z6I8 188 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 HIST1H2BLQ99880 126 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 DOCK4Q8N1I0 1966 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 IGLV3-19P01714 112 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 MPZP25189 248 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 OR10W1Q8NGF6 305 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 FAM57AQ8TBR7 257 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 CDKN1AP38936 164 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 TMEM101Q96IK0 257 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 TOMM7Q9P0U1 55 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 HEATR5BQ9P2D3 2071 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 EFNA2O43921 213 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 EVI2AP22794 236 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 IGLV3-12A0A075B6K2 115 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 A0A1B0GW15 77 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 FOXG1P55316 489 aaPredicted RBP14.65□□□□□ -0.06
NPHP4-209ENST00000489180 DERL1Q9BUN8 251 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 H7C1H1 209 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 Q6AWC8 147 aa14.65□□□□□ -0.06
NPHP4-209ENST00000489180 COLCA2A8K830 154 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 CD5P06127 495 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 HGFACQ04756 655 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 NHP2Q9NX24 153 aaKnown RBP14.64□□□□□ -0.07
NPHP4-209ENST00000489180 CASP8AP2Q9UKL3 1982 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 C19orf67A6NJJ6 358 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 NBR2O15453 112 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 DUTP33316 252 aaKnown RBP14.64□□□□□ -0.07
NPHP4-209ENST00000489180 SUPT4H1P63272 117 aaKnown RBP14.64□□□□□ -0.07
NPHP4-209ENST00000489180 GLRX5Q86SX6 157 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 CLDN16Q9Y5I7 305 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 IGKV1-27A0A075B6S5 117 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 TCRBV4S1A1TA0A5B7 111 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 FBLN7Q53RD9 439 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 OR10J3Q5JRS4 329 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 SPATA31B1PQ5VZV4 182 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 KLHDC3Q9BQ90 382 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 MRPS18CQ9Y3D5 142 aaKnown RBP14.64□□□□□ -0.07
NPHP4-209ENST00000489180 OR5AN1Q8NGI8 311 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 TEX38Q6PEX7 206 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 C2orf88Q9BSF0 95 aa14.64□□□□□ -0.07
NPHP4-209ENST00000489180 RNF144BQ7Z419 303 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 FAM169BQ8N8A8 192 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 RNF125Q96EQ8 232 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 APC2O95996 2303 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 PF4P02776 101 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 OSTCQ9NRP0 149 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 SPRR3Q9UBC9 169 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 SELENOKQ9Y6D0 94 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 CEP290O15078 2479 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 HIST3H2BBQ8N257 126 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 DPH3Q96FX2 82 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 JMJD8Q96S16 334 aa14.63□□□□□ -0.07
NPHP4-209ENST00000489180 A0A1W2PRX2 142 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 GZMBP10144 247 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 ZIC4Q8N9L1 334 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 COQ2Q96H96 371 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 LINC01587Q99440 93 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 TRAV9-2A0A087WT02 112 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 IGHV1-18A0A0C4DH31 117 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 CRYGSP22914 178 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 TIMP3P35625 211 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 LINC00469Q8N7U9 141 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 WFDC12Q8WWY7 111 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 MEGF9Q9H1U4 602 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 C5orf63A6NC05 138 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 FABP5P3A8MUU1 101 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 PSG8Q9UQ74 426 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 GREB1Q4ZG55 1949 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 RALGAPA2Q2PPJ7 1873 aa14.62□□□□□ -0.07
NPHP4-209ENST00000489180 CACNG7P62955 275 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 VKORC1Q9BQB6 163 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 ZNF257Q9Y2Q1 563 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 LOC102723996A0A087X1L8 192 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 IGLV3-32A0A0A0MS00 114 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 CD7P09564 240 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 PRCDQ00LT1 54 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 TMEM95Q3KNT9 176 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 TREML4Q6UXN2 200 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 MBD3L1Q8WWY6 194 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 GFRA3O60609 400 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 TMEM133Q9H2Q1 129 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 IGHV4-39P01824 125 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 NEU4Q8WWR8 484 aaPredicted RBP14.61□□□□□ -0.07
NPHP4-209ENST00000489180 A0A0G2JLM5 398 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 A0A1B0GV72 72 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 GNB1LQ9BYB4 327 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 REG4Q9BYZ8 158 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 WDR83OSQ9Y284 106 aa14.61□□□□□ -0.07
NPHP4-209ENST00000489180 CFHR1Q03591 330 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 C7orf69Q9H7B7 122 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 A0A1W2PRE2 83 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 AMBPP02760 352 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 NUDT10Q8NFP7 164 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 C5orf30Q96GV9 206 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 A0A0G2JMZ2 1700 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 LRRC37A2A6NM11 1700 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 HBDP02042 147 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 LHFPL1Q86WI0 220 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 AHCTF1Q8WYP5 2266 aa14.6□□□□□ -0.07
NPHP4-209ENST00000489180 SELLP14151 372 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms