RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 OR10C1Q96KK4 312 aa10.42□□□□□ -0.74
VTI1A-206ENST00000489142 RABL2AQ9UBK7 228 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-206ENST00000489142 RABL2BQ9UNT1 228 aa10.42□□□□□ -0.74
VTI1A-206ENST00000489142 TRAV14DV4A0A0A6YYC5 116 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 A0A1B0GU03 582 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 INS-IGF2F8WCM5 200 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 B3GALNT1O75752 331 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 AKR1C4P17516 323 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
VTI1A-206ENST00000489142 SUB1P53999 127 aaKnown RBP eCLIP10.41□□□□□ -0.74
VTI1A-206ENST00000489142 SPCS3P61009 180 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 DHODHQ02127 395 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 PYDC2Q56P42 97 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 PVRIGQ6DKI7 326 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 APRG1Q8IVJ8 170 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 ST8SIA2Q92186 375 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-206ENST00000489142 SCP2D1Q9UJQ7 156 aa10.41□□□□□ -0.74
VTI1A-206ENST00000489142 PUS1Q9Y606 427 aaKnown RBP eCLIP10.41□□□□□ -0.74
VTI1A-206ENST00000489142 OR4C46A6NHA9 309 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 CEBPZOSA8MTT3 80 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 TMEM50AO95807 157 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 NPBWR1P48145 328 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 TMEM187Q14656 261 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 FAM219AQ8IW50 185 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 LILRB2Q8N423 598 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 OVOL2Q9BRP0 275 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 HEYLQ9NQ87 328 aaPredicted RBP10.4□□□□□ -0.74
VTI1A-206ENST00000489142 TMEM56-RWDD3S4R434 201 aa10.4□□□□□ -0.74
VTI1A-206ENST00000489142 DYNC2H1Q8NCM8 4307 aaKnown RBP10.39□□□□□ -0.75
VTI1A-206ENST00000489142 CORTO00230 105 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 SUPT4H1P63272 117 aaKnown RBP10.39□□□□□ -0.75
VTI1A-206ENST00000489142 KLF9Q13886 244 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-206ENST00000489142 DEFB135Q30KP9 77 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 BSXQ3C1V8 233 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 TIGITQ495A1 244 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 AARDQ4LEZ3 155 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 ZNF600Q6ZNG1 722 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 TCF24Q7RTU0 167 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 WFDC3Q8IUB2 231 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 TRIM63Q969Q1 353 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 V9GYH0 126 aa10.39□□□□□ -0.75
VTI1A-206ENST00000489142 LYSTQ99698 3801 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 CLN5O75503 358 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 ZNF79Q15937 498 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 FAM90A2PQ658T7 463 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 LYZL2Q7Z4W2 148 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 TMED4Q7Z7H5 227 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 OR52E5Q8NH55 327 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 TMEM170AQ8WVE7 144 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 GINS3Q9BRX5 216 aa10.38□□□□□ -0.75
VTI1A-206ENST00000489142 DFFBO76075 338 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 SULT1A3P0DMM9 295 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 SULT1A4P0DMN0 295 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 HTR2BP41595 481 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 RND2P52198 227 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 RPL11P62913 178 aaKnown RBP10.37□□□□□ -0.75
VTI1A-206ENST00000489142 SLC24A4Q8NFF2 622 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 OR4X1Q8NH49 305 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 GALNT14Q96FL9 552 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 RBM38Q9H0Z9 239 aaKnown RBP10.37□□□□□ -0.75
VTI1A-206ENST00000489142 VSIRQ9H7M9 311 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 KCNIP3Q9Y2W7 256 aa10.37□□□□□ -0.75
VTI1A-206ENST00000489142 LCE6AA0A183 80 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 IGKV1-17P01599 117 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 S100A5P33763 92 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 APOC4P55056 127 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 TOMM5Q8N4H5 51 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 FAM24BQ8N5W8 94 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 IL22RA2Q969J5 263 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 SCGB3A2Q96PL1 93 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 MS4A6AQ9H2W1 248 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 RBKSQ9H477 322 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 MAP6D1Q9H9H5 199 aa10.36□□□□□ -0.75
VTI1A-206ENST00000489142 DNASE2O00115 360 aaPredicted RBP10.35□□□□□ -0.75
VTI1A-206ENST00000489142 SPRY2O43597 315 aa10.35□□□□□ -0.75
VTI1A-206ENST00000489142 NPY1RP25929 384 aa10.35□□□□□ -0.75
VTI1A-206ENST00000489142 FAUP35544 74 aaKnown RBP10.35□□□□□ -0.75
VTI1A-206ENST00000489142 EWSR1Q01844 656 aaKnown RBP eCLIP10.35□□□□□ -0.75
VTI1A-206ENST00000489142 TNFRSF9Q07011 255 aa10.35□□□□□ -0.75
VTI1A-206ENST00000489142 SMCO1Q147U7 214 aa10.35□□□□□ -0.75
VTI1A-206ENST00000489142 NMSQ5H8A3 153 aa10.35□□□□□ -0.75
VTI1A-206ENST00000489142 LEMD1Q68G75 181 aa10.35□□□□□ -0.75
VTI1A-206ENST00000489142 PRSS54Q6PEW0 395 aa10.35□□□□□ -0.75
VTI1A-206ENST00000489142 RABAC1Q9UI14 185 aa10.35□□□□□ -0.75
VTI1A-206ENST00000489142 A0A0B4J2A0 478 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 A0A0J9YWU9 116 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 RPS10-NUDT3A0A1W2PQS6 291 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 IFNA10P01566 189 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 IGLC1P0CG04 106 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 NPPCP23582 126 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 OR10J1P30954 320 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 CCR6P51684 374 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 RBMS2Q15434 407 aaKnown RBP10.34□□□□□ -0.75
VTI1A-206ENST00000489142 CCDC190Q86UF4 302 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 LGI3Q8N145 548 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
VTI1A-206ENST00000489142 ACY3Q96HD9 319 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms