RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MLANAQ16655 118 aa18.63■□□□□ 0.57
HMGN1-217ENST00000489072 CASC10Q5T4H9 136 aa18.63■□□□□ 0.57
HMGN1-217ENST00000489072 LAMTOR1Q6IAA8 161 aa18.63■□□□□ 0.57
HMGN1-217ENST00000489072 SCGB3A2Q96PL1 93 aa18.63■□□□□ 0.57
HMGN1-217ENST00000489072 STARD9Q9P2P6 4700 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 CHEK1O14757 476 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 AKR1C4P17516 323 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 CCDC190Q86UF4 302 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 TMEM116Q8NCL8 245 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 IL22RA2Q969J5 263 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 RNF2Q99496 336 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 RHPN1-AS1Q9BWJ2 59 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 KCNIP3Q9Y2W7 256 aa18.62■□□□□ 0.57
HMGN1-217ENST00000489072 CORTO00230 105 aa18.61■□□□□ 0.57
HMGN1-217ENST00000489072 TMEM50AO95807 157 aa18.61■□□□□ 0.57
HMGN1-217ENST00000489072 TOMM20LQ6UXN7 152 aa18.61■□□□□ 0.57
HMGN1-217ENST00000489072 UBQLN2Q9UHD9 624 aa18.61■□□□□ 0.57
HMGN1-217ENST00000489072 DYNC2H1Q8NCM8 4307 aaKnown RBP18.6■□□□□ 0.57
HMGN1-217ENST00000489072 LYL1P12980 280 aa18.6■□□□□ 0.57
HMGN1-217ENST00000489072 S100A5P33763 92 aa18.6■□□□□ 0.57
HMGN1-217ENST00000489072 ODF3L2Q3SX64 289 aa18.6■□□□□ 0.57
HMGN1-217ENST00000489072 TOMM5Q8N4H5 51 aa18.6■□□□□ 0.57
HMGN1-217ENST00000489072 ZFAND3Q9H8U3 227 aa18.6■□□□□ 0.57
HMGN1-217ENST00000489072 HEYLQ9NQ87 328 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-217ENST00000489072 TENM2Q9NT68 2774 aa18.6■□□□□ 0.57
HMGN1-217ENST00000489072 IGHV3OR16-13A0A075B7E8 117 aa18.59■□□□□ 0.57
HMGN1-217ENST00000489072 TRAV14DV4A0A0A6YYC5 116 aa18.59■□□□□ 0.57
HMGN1-217ENST00000489072 IGHV3-74A0A0B4J1X5 117 aa18.59■□□□□ 0.57
HMGN1-217ENST00000489072 ZNF701M0R085 212 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-217ENST00000489072 NXPH3O95157 252 aa18.59■□□□□ 0.57
HMGN1-217ENST00000489072 FAUP35544 74 aaKnown RBP18.59■□□□□ 0.57
HMGN1-217ENST00000489072 OPRK1P41145 380 aa18.59■□□□□ 0.57
HMGN1-217ENST00000489072 HTR2BP41595 481 aa18.59■□□□□ 0.57
HMGN1-217ENST00000489072 ZNF600Q6ZNG1 722 aa18.59■□□□□ 0.57
HMGN1-217ENST00000489072 GGTLC1Q9BX51 225 aa18.59■□□□□ 0.57
HMGN1-217ENST00000489072 PUS1Q9Y606 427 aaKnown RBP eCLIP18.59■□□□□ 0.57
HMGN1-217ENST00000489072 A0A1B0GU03 582 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 CEBPZOSA8MTT3 80 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 SULT1A3P0DMM9 295 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 SULT1A4P0DMN0 295 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 AP3S2P59780 193 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 NMSQ5H8A3 153 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 LYZL2Q7Z4W2 148 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 OR4X1Q8NH49 305 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 TMEM170AQ8WVE7 144 aa18.58■□□□□ 0.56
HMGN1-217ENST00000489072 LOC102724200A0A096LPH7 203 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-217ENST00000489072 A0A0B4J2A0 478 aa18.57■□□□□ 0.56
HMGN1-217ENST00000489072 OR4C46A6NHA9 309 aa18.57■□□□□ 0.56
HMGN1-217ENST00000489072 CLN5O75503 358 aa18.57■□□□□ 0.56
HMGN1-217ENST00000489072 C2orf83Q53S99 150 aa18.57■□□□□ 0.56
HMGN1-217ENST00000489072 GINS3Q9BRX5 216 aa18.57■□□□□ 0.56
HMGN1-217ENST00000489072 SHPKQ9UHJ6 478 aa18.57■□□□□ 0.56
HMGN1-217ENST00000489072 APOHP02749 345 aaPredicted RBP18.56■□□□□ 0.56
HMGN1-217ENST00000489072 FAM90A2PQ658T7 463 aa18.56■□□□□ 0.56
HMGN1-217ENST00000489072 ZFAND6Q6FIF0 208 aa18.56■□□□□ 0.56
HMGN1-217ENST00000489072 TMED4Q7Z7H5 227 aa18.56■□□□□ 0.56
HMGN1-217ENST00000489072 LGI3Q8N145 548 aa18.55■□□□□ 0.56
HMGN1-217ENST00000489072 LILRB2Q8N423 598 aa18.55■□□□□ 0.56
HMGN1-217ENST00000489072 SLC24A4Q8NFF2 622 aa18.55■□□□□ 0.56
HMGN1-217ENST00000489072 ST8SIA2Q92186 375 aa18.55■□□□□ 0.56
HMGN1-217ENST00000489072 VSIRQ9H7M9 311 aa18.55■□□□□ 0.56
HMGN1-217ENST00000489072 IGKV3-7A0A075B6H7 116 aa18.54■□□□□ 0.56
HMGN1-217ENST00000489072 IGKV1-17P01599 117 aa18.54■□□□□ 0.56
HMGN1-217ENST00000489072 ANXA3P12429 323 aa18.54■□□□□ 0.56
HMGN1-217ENST00000489072 CCR6P51684 374 aa18.54■□□□□ 0.56
HMGN1-217ENST00000489072 SMCO1Q147U7 214 aa18.54■□□□□ 0.56
HMGN1-217ENST00000489072 SRRQ9GZT4 340 aa18.54■□□□□ 0.56
HMGN1-217ENST00000489072 HSPB7Q9UBY9 170 aa18.54■□□□□ 0.56
HMGN1-217ENST00000489072 TFPI2P48307 235 aa18.53■□□□□ 0.56
HMGN1-217ENST00000489072 SRPXP78539 464 aa18.53■□□□□ 0.56
HMGN1-217ENST00000489072 TNFRSF9Q07011 255 aa18.53■□□□□ 0.56
HMGN1-217ENST00000489072 TIGITQ495A1 244 aa18.53■□□□□ 0.56
HMGN1-217ENST00000489072 PRSS54Q6PEW0 395 aa18.53■□□□□ 0.56
HMGN1-217ENST00000489072 RNASEH2CQ8TDP1 164 aaKnown RBP18.53■□□□□ 0.56
HMGN1-217ENST00000489072 DEDD2Q8WXF8 326 aa18.53■□□□□ 0.56
HMGN1-217ENST00000489072 IGHV3-66A0A0C4DH42 116 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 RPS10-NUDT3A0A1W2PQS6 291 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 NPY1RP25929 384 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 TMEM128Q5BJH2 165 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 SPANXN2Q5MJ10 180 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 TCF24Q7RTU0 167 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 GBGT1Q8N5D6 347 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 SLC25A21Q9BQT8 299 aaPredicted RBP18.52■□□□□ 0.56
HMGN1-217ENST00000489072 OVOL2Q9BRP0 275 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 RBKSQ9H477 322 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 CACFD1Q9UGQ2 172 aa18.52■□□□□ 0.56
HMGN1-217ENST00000489072 RND2P52198 227 aa18.51■□□□□ 0.55
HMGN1-217ENST00000489072 LYSTQ99698 3801 aa18.5■□□□□ 0.55
HMGN1-217ENST00000489072 IGLC1P0CG04 106 aa18.5■□□□□ 0.55
HMGN1-217ENST00000489072 ZNF124Q15973 351 aa18.5■□□□□ 0.55
HMGN1-217ENST00000489072 APRG1Q8IVJ8 170 aa18.5■□□□□ 0.55
HMGN1-217ENST00000489072 DTD1Q8TEA8 209 aa18.5■□□□□ 0.55
HMGN1-217ENST00000489072 TRAV30A0A087WSZ9 112 aa18.49■□□□□ 0.55
HMGN1-217ENST00000489072 DFFBO76075 338 aa18.49■□□□□ 0.55
HMGN1-217ENST00000489072 SLC25A4P12235 298 aa18.49■□□□□ 0.55
HMGN1-217ENST00000489072 VAMP1P23763 118 aa18.49■□□□□ 0.55
HMGN1-217ENST00000489072 BMI1P35226 326 aa18.49■□□□□ 0.55
HMGN1-217ENST00000489072 BAK1Q16611 211 aa18.49■□□□□ 0.55
HMGN1-217ENST00000489072 RYR2Q92736 4967 aa18.48■□□□□ 0.55
HMGN1-217ENST00000489072 DUXBA0A1W2PPF3 345 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms