RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-231	ENST00000488905	MRPL36	Q9P0J6	103 aa	Known RBP	13.42	□□□□□ -0.26
HDAC6-231	ENST00000488905	PKHD1	P08F94	4074 aa		13.42	□□□□□ -0.26
HDAC6-231	ENST00000488905	C3orf85	A0A1B0GTC6	90 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905		A0A1W2PS18	150 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	CLN5	O75503	358 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	TNFAIP8	O95379	198 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	NPPC	P23582	126 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	OPRK1	P41145	380 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	PPP5C	P53041	499 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	PRR20E	P86478	221 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	PRR20C	P86479	221 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	PRR20D	P86480	221 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	PRR20B	P86481	221 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	PRR20A	P86496	221 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	TRPT1	Q86TN4	253 aa	Known RBP	13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	STXBP6	Q8NFX7	210 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	METTL26	Q96S19	204 aa		13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.41	□□□□□ -0.26
HDAC6-231	ENST00000488905	DNAH2	Q9P225	4427 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905		K7EQG2	157 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	SCGB2A1	O75556	95 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	CD3D	P04234	171 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	GIG44	P09565	113 aa	Predicted RBP	13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	CRYBB3	P26998	211 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	ETV6	P41212	452 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	P2RY1	P47900	373 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	TRIM16L	Q309B1	348 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	TMEM41B	Q5BJD5	291 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	OR4X1	Q8NH49	305 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	GRAMD2B	Q96HH9	432 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	KRTAP17-1	Q9BYP8	105 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	HRH4	Q9H3N8	390 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	ENY2	Q9NPA8	101 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905	KLK11	Q9UBX7	282 aa		13.4	□□□□□ -0.26
HDAC6-231	ENST00000488905		A0A0G2JRQ6	117 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	FAM25A	B3EWG3	89 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	FAM25C	B3EWG5	89 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	FAM25G	B3EWG6	89 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	C11orf94	C9JXX5	98 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	SPP1	P10451	314 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	TBP	P20226	339 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	C4BPB	P20851	252 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	BSX	Q3C1V8	233 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	CCDC71L	Q8N9Z2	235 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	NARS2	Q96I59	477 aa	Known RBP	13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	COPZ2	Q9P299	210 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	KIAA1109	Q2LD37	5005 aa		13.39	□□□□□ -0.27
HDAC6-231	ENST00000488905	IGHV4-28	A0A0C4DH34	117 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	ZNF688	P0C7X2	276 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	MIF	P14174	115 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	UCP1	P25874	307 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	RPL5	P46777	297 aa	Known RBP	13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	RORC	P51449	518 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	SP6	Q3SY56	376 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	MORN3	Q6PF18	240 aa	Predicted RBP	13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	OR52I2	Q8NH67	350 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	RNASE11	Q8TAA1	199 aa	Known RBP	13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	DCANP1	Q8TF63	244 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	RRNAD1	Q96FB5	475 aa	Known RBP	13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	PCLO	Q9Y6V0	5065 aa		13.38	□□□□□ -0.27
HDAC6-231	ENST00000488905	IGLL5	B9A064	214 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	IGKV1-17	P01599	117 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	RBMY1A1	P0DJD3	496 aa	Known RBP	13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	RBMY1C	P0DJD4	496 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	RBMY1F	Q15415	496 aa	Known RBP	13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	MZT2A	Q6P582	158 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	OR4D10	Q8NGI6	311 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	OR13C8	Q8NGS7	320 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	TMEM230	Q96A57	120 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	MTFP1	Q9UDX5	166 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	APLN	Q9ULZ1	77 aa		13.37	□□□□□ -0.27
HDAC6-231	ENST00000488905	DNAH17	Q9UFH2	4485 aa		13.36	□□□□□ -0.27
HDAC6-231	ENST00000488905	KNCN	A6PVL3	124 aa		13.36	□□□□□ -0.27
HDAC6-231	ENST00000488905	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.36	□□□□□ -0.27
HDAC6-231	ENST00000488905	B3GALNT1	O75752	331 aa		13.36	□□□□□ -0.27
HDAC6-231	ENST00000488905	MLANA	Q16655	118 aa		13.36	□□□□□ -0.27
HDAC6-231	ENST00000488905	TIGIT	Q495A1	244 aa		13.36	□□□□□ -0.27
HDAC6-231	ENST00000488905	ZFAND1	Q8TCF1	268 aa		13.36	□□□□□ -0.27
HDAC6-231	ENST00000488905	EXTL2	Q9UBQ6	330 aa		13.36	□□□□□ -0.27
HDAC6-231	ENST00000488905	TRAV30	A0A087WSZ9	112 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905	SPCS3	P61009	180 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905	SCGB2B2	Q4G0G5	96 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905	AARD	Q4LEZ3	155 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905		Q6ZRM9	215 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905		Q6ZTC4	211 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905	FAM219A	Q8IW50	185 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905	TERB2	Q8NHR7	220 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905	AP3S1	Q92572	193 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905		X6R8D5	127 aa		13.35	□□□□□ -0.27
HDAC6-231	ENST00000488905	CD74	P04233	296 aa		13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	IGLC1	P0CG04	106 aa		13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	HLA-DMB	P28068	263 aa		13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	HTR2B	P41595	481 aa		13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	EIF2B2	P49770	351 aa	Known RBP	13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	TAS2R19	P59542	299 aa		13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	ACTL10	Q5JWF8	245 aa		13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	OR1S2	Q8NGQ3	325 aa		13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	OR52E5	Q8NH55	327 aa		13.34	□□□□□ -0.27
HDAC6-231	ENST00000488905	MARCH1	Q8TCQ1	289 aa		13.34	□□□□□ -0.27

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