RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 OR4P4Q8NGL7 312 aa14.84□□□□□ -0.03
COL16A1-215ENST00000488897 SLC25A10Q9UBX3 287 aaPredicted RBP14.84□□□□□ -0.03
COL16A1-215ENST00000488897 OR51B2Q9Y5P1 312 aa14.84□□□□□ -0.03
COL16A1-215ENST00000488897 ADMP35318 185 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 GATA4P43694 442 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 LYG1Q8N1E2 194 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 TMEM256Q8N2U0 113 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 FLNAP21333 2647 aaKnown RBP14.83□□□□□ -0.04
COL16A1-215ENST00000488897 SCGB1D1O95968 90 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 SELENOTP62341 195 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 SSX2Q16385 188 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 UTF1Q5T230 341 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 TCF23Q7RTU1 214 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 ZNF257Q9Y2Q1 563 aa14.83□□□□□ -0.04
COL16A1-215ENST00000488897 FOXH1O75593 365 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 TNFSF4P23510 183 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 HINT2Q9BX68 163 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 TMEM167BQ9NRX6 74 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 RNF7Q9UBF6 113 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 K7EN84 100 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 LINC00869P0C866 280 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 SELLP14151 372 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 ATP5IP56385 69 aaPredicted RBP14.82□□□□□ -0.04
COL16A1-215ENST00000488897 RAB4BP61018 213 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 ZNF439Q8NDP4 499 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 EAF1Q96JC9 268 aaPredicted RBP14.82□□□□□ -0.04
COL16A1-215ENST00000488897 MS4A10Q96PG2 267 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 PLEKHA3Q9HB20 300 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 SLC45A2Q9UMX9 530 aa14.82□□□□□ -0.04
COL16A1-215ENST00000488897 J3QR06 171 aa14.81□□□□□ -0.04
COL16A1-215ENST00000488897 TMEM30BQ3MIR4 351 aa14.81□□□□□ -0.04
COL16A1-215ENST00000488897 MISP3Q96FF7 219 aa14.81□□□□□ -0.04
COL16A1-215ENST00000488897 TMEM106BQ9NUM4 274 aa14.81□□□□□ -0.04
COL16A1-215ENST00000488897 EFNA4P52798 201 aa14.81□□□□□ -0.04
COL16A1-215ENST00000488897 PRCDQ00LT1 54 aa14.81□□□□□ -0.04
COL16A1-215ENST00000488897 USF2Q15853 346 aaPredicted RBP14.81□□□□□ -0.04
COL16A1-215ENST00000488897 DEFB113Q30KQ7 82 aa14.81□□□□□ -0.04
COL16A1-215ENST00000488897 CMTM2Q8TAZ6 248 aa14.81□□□□□ -0.04
COL16A1-215ENST00000488897 TLN2Q9Y4G6 2542 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 UPK2O00526 184 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 OR10J1P30954 320 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 PAFAH1B2P68402 229 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 HLA-DRB5Q30154 266 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 MIR17HGQ75NE6 70 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 SLC35E1Q96K37 410 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 BPESC1Q9GZL8 116 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 NAGKQ9UJ70 344 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 CSPG4Q6UVK1 2322 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 CREBBPQ92793 2442 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 IGHV4-30-2A0A087WSY4 118 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 NUPR1O60356 82 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 RPEL1Q2QD12 228 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 STUMQ69YW2 141 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 LYPD2Q6UXB3 125 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 NABP2Q9BQ15 211 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 LINC00574Q9H8X3 128 aa14.8□□□□□ -0.04
COL16A1-215ENST00000488897 TECRQ9NZ01 308 aaKnown RBP14.8□□□□□ -0.04
COL16A1-215ENST00000488897 A0A1B0GUS0 222 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 HELTA6NFD8 242 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 SLC17A3O00476 420 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 TNFRSF1AP19438 455 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 LGALS4P56470 323 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 RPL19P84098 196 aaKnown RBP14.79□□□□□ -0.04
COL16A1-215ENST00000488897 PSG5Q15238 335 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 RTL8BQ17RB0 113 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 WFDC11Q8NEX6 87 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 C19orf24Q9BVV8 132 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 MRPL18Q9H0U6 180 aaKnown RBP14.79□□□□□ -0.04
COL16A1-215ENST00000488897 DSCAML1Q8TD84 2053 aa14.79□□□□□ -0.04
COL16A1-215ENST00000488897 ACTL6BO94805 426 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 GOSR1O95249 250 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 NDUFB7P17568 137 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 CBLN1P23435 193 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 TPPP2P59282 170 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 ERVFC1-1P60608 527 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 C1orf194Q5T5A4 169 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 TRBV9A0A0B4J1U6 114 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 TMEM178BH3BS89 294 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 SNRPCP09234 159 aaKnown RBP14.78□□□□□ -0.04
COL16A1-215ENST00000488897 ESDP10768 282 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 MYOD1P15172 320 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 CRISP2P16562 243 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 GNG4P50150 75 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 GNG10P50151 68 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 PQLC2Q6ZP29 291 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 OR1L6Q8NGR2 347 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 GAFA1Q96PS6 74 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 SLC35D1Q9NTN3 355 aa14.78□□□□□ -0.04
COL16A1-215ENST00000488897 C2orf83Q53S99 150 aa14.77□□□□□ -0.04
COL16A1-215ENST00000488897 MMD2Q8IY49 270 aa14.77□□□□□ -0.04
COL16A1-215ENST00000488897 PNKDQ8N490 385 aa14.77□□□□□ -0.04
COL16A1-215ENST00000488897 GRIFINA4D1Z8 144 aa14.77□□□□□ -0.05
COL16A1-215ENST00000488897 OR10J4P0C629 311 aa14.77□□□□□ -0.05
COL16A1-215ENST00000488897 CT45A6P0DMU7 189 aa14.77□□□□□ -0.05
COL16A1-215ENST00000488897 CT45A5P0DMU8 189 aa14.77□□□□□ -0.05
COL16A1-215ENST00000488897 CT45A7P0DMV0 189 aa14.77□□□□□ -0.05
COL16A1-215ENST00000488897 TAS2R45P59539 299 aa14.77□□□□□ -0.05
COL16A1-215ENST00000488897 RANP62826 216 aaKnown RBP14.77□□□□□ -0.05
COL16A1-215ENST00000488897 SLC25A48Q6ZT89 311 aaKnown RBP14.77□□□□□ -0.05
COL16A1-215ENST00000488897 RPUSD1Q9UJJ7 312 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms