RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 RPL12P30050 165 aaKnown RBP9.55□□□□□ -0.88
TRAIP-209ENST00000488860 GPR183P32249 361 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 SULT1A1P50225 295 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 AKR1C1Q04828 323 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 CD69Q07108 199 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 SLC38A11Q08AI6 406 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 KIAA0141Q14154 515 aaPredicted RBP9.55□□□□□ -0.88
TRAIP-209ENST00000488860 MLANAQ16655 118 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 KLK9Q2XQG4 91 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 DEFB136Q30KP8 78 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 ETFRF1Q6IPR1 90 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 CLEC19AQ6UXS0 136 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 C8orf86Q6ZUL3 223 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 HAPLN4Q86UW8 402 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 TCTE3Q8IZS6 198 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 VN1R17PQ8TDU5 208 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 ACY3Q96HD9 319 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 UBE2E2Q96LR5 201 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 C21orf62Q9NYP8 219 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 KLK9Q9UKQ9 250 aa9.55□□□□□ -0.88
TRAIP-209ENST00000488860 TRBV7-1A0A0A6YYK4 115 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 OR2T8A6NH00 312 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 PMS2P5A8MQ11 134 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 ARPC5O15511 151 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 PFDN1O60925 122 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 SCAF4O95104 1147 aaKnown RBP9.54□□□□□ -0.88
TRAIP-209ENST00000488860 CDX1P47902 265 aaPredicted RBP9.54□□□□□ -0.88
TRAIP-209ENST00000488860 RND2P52198 227 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 AP2S1P53680 142 aaPredicted RBP9.54□□□□□ -0.88
TRAIP-209ENST00000488860 MFAP4P55083 255 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 HBG1P69891 147 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 HBG2P69892 147 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 NHLH2Q02577 135 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 BAXQ07812 192 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 ARL16Q0P5N6 197 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 ZNF546Q86UE3 836 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 NDUFA11Q86Y39 141 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 INO80EQ8NBZ0 244 aaPredicted RBP9.54□□□□□ -0.88
TRAIP-209ENST00000488860 OR1S2Q8NGQ3 325 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 ZNF502Q8TBZ5 544 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 C4orf3Q8WVX3 66 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 MDFIQ99750 246 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 CITED1Q99966 193 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 ZNF747Q9BV97 191 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 SMIM3Q9BZL3 60 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 MRPL36Q9P0J6 103 aaKnown RBP9.54□□□□□ -0.88
TRAIP-209ENST00000488860 HSPB11Q9Y547 144 aa9.54□□□□□ -0.88
TRAIP-209ENST00000488860 UBE2L5PA0A1B0GUS4 154 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 PRSS46E5RG02 174 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 PPP5D1E7EU14 171 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 GNG7O60262 68 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 TRBV12-3P01733 135 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 DLK1P80370 383 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 CLINT1Q14677 625 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 ZNF343Q6P1L6 599 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 BSCL2Q96G97 398 aaPredicted RBP9.53□□□□□ -0.88
TRAIP-209ENST00000488860 DUX3Q96PT4 197 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 NEURL2Q9BR09 285 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 TNFSF18Q9UNG2 199 aa9.53□□□□□ -0.88
TRAIP-209ENST00000488860 IGHV4OR15-8A0A075B7B6 117 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 A0A087WW49 117 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.52□□□□□ -0.89
TRAIP-209ENST00000488860 C1QBP02746 253 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 ARL3P36405 182 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 GPX4P36969 197 aaPredicted RBP9.52□□□□□ -0.89
TRAIP-209ENST00000488860 NPBWR1P48145 328 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 GAMTQ14353 236 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 ZFP69Q49AA0 526 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 OR11H4Q8NGC9 324 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 OR5C1Q8NGR4 320 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 NPIPB3Q92617 1050 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 AQP10Q96PS8 301 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 PEF1Q9UBV8 284 aaKnown RBP9.52□□□□□ -0.89
TRAIP-209ENST00000488860 TENM1Q9UKZ4 2725 aa9.52□□□□□ -0.89
TRAIP-209ENST00000488860 RNF222A6NCQ9 220 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 ADARB2-AS1A8MUL3 147 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
TRAIP-209ENST00000488860 I3L521 148 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 TGOLN2O43493 480 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 CLN5O75503 358 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 SCGB2A1O75556 95 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 CLEC3BP05452 202 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 S100A11P31949 105 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 EIF2B2P49770 351 aaKnown RBP9.51□□□□□ -0.89
TRAIP-209ENST00000488860 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 OR4X1Q8NH49 305 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 CACNG8Q8WXS5 425 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 DPF1Q92782 380 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 TMEM147Q9BVK8 224 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 MFFQ9GZY8 342 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 UQCC1Q9NVA1 299 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 GAR1Q9NY12 217 aaKnown RBP9.51□□□□□ -0.89
TRAIP-209ENST00000488860 FBXL17Q9UF56 701 aa9.51□□□□□ -0.89
TRAIP-209ENST00000488860 IGHV3-35A0A0C4DH35 117 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 ZFP92A6NM28 416 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 BMPR1BO00238 502 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 NUPL2O15504 423 aaKnown RBP9.5□□□□□ -0.89
TRAIP-209ENST00000488860 HSPB1P04792 205 aaKnown RBP9.5□□□□□ -0.89
TRAIP-209ENST00000488860 OR10J1P30954 320 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms