RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CPT1CQ8TCG5 803 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 ASCL2Q99929 193 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 GAGE12HA6NDE8 117 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 GATA3P23771 443 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 APOBEC3AP31941 199 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-229ENST00000488765 MORN5Q5VZ52 161 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 HCFC1P51610 2035 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 CEP192Q8TEP8 1941 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 F2RL2O00254 374 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 NMUP48645 174 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 WFDC2Q14508 124 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 TMUB1Q9BVT8 246 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 ZNF503-AS2A6NEH8 195 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 INSL3P51460 131 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
MCF2L-229ENST00000488765 DUSP23Q9BVJ7 150 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 MED13Q9UHV7 2174 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 PCNX2A6NKB5 2137 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 SPTA1P02549 2419 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 KALRNO60229 2985 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 NRN1LQ496H8 165 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 DHRS13Q6UX07 377 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 LRRC29Q8WV35 223 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 FZR1Q9UM11 496 aa13.28□□□□□ -0.28
MCF2L-229ENST00000488765 A0A0G2JMM0 328 aa13.27□□□□□ -0.28
MCF2L-229ENST00000488765 A0A1W2PPB8 328 aa13.27□□□□□ -0.28
MCF2L-229ENST00000488765 KIR3DP1A8MWS1 328 aa13.27□□□□□ -0.28
MCF2L-229ENST00000488765 PYYP10082 97 aa13.27□□□□□ -0.28
MCF2L-229ENST00000488765 FCGR2BP31994 310 aaPredicted RBP13.27□□□□□ -0.28
MCF2L-229ENST00000488765 MC5RP33032 325 aa13.27□□□□□ -0.28
MCF2L-229ENST00000488765 RTL8BQ17RB0 113 aa13.27□□□□□ -0.28
MCF2L-229ENST00000488765 ADAMTSL5Q6ZMM2 481 aa13.27□□□□□ -0.28
MCF2L-229ENST00000488765 LY6G6EA0A0G2JKS1 128 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 PSPNO60542 156 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 CELA3AP09093 270 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 GDF1P27539 372 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 PSG3Q16557 428 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 ETDBQ3ZM63 59 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 VSTM2AQ8TAG5 236 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 SPACA9Q96E40 222 aaPredicted RBP13.27□□□□□ -0.29
MCF2L-229ENST00000488765 C1RLQ9NZP8 487 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 U3KQA8 63 aa13.27□□□□□ -0.29
MCF2L-229ENST00000488765 KMT2EQ8IZD2 1858 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 LOC389332A0A1B0GUA5 103 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 C12orf77C9JDV5 145 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 WNT9BO14905 357 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 PPIFP30405 207 aaKnown RBP13.26□□□□□ -0.29
MCF2L-229ENST00000488765 RAB31Q13636 194 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 SLC35E4Q6ICL7 350 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 AMTNQ6UX39 209 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 ZNF645Q8N7E2 425 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 TIMM23BQ5SRD1 257 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 TEPPQ6URK8 271 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 LCNL1Q6ZST4 164 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 GALMQ96C23 342 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 ZNF503Q96F45 646 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 SH2D2AQ9NP31 389 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 B4GALT7Q9UBV7 327 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 POLEQ07864 2286 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 FAM106CPP0CH98 169 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 GCSHP23434 173 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 CATR1Q13166 79 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 FAM106AQ4KMX7 169 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 PMS2CLQ68D20 193 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 ZNF826PQ6ZT77 177 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 PCP2Q8IVA1 136 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 NABP2Q9BQ15 211 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 TPPP3Q9BW30 176 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 SS18L2Q9UHA2 77 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 ZNF391Q9UJN7 358 aa13.26□□□□□ -0.29
MCF2L-229ENST00000488765 TMEM177Q53S58 311 aa13.25□□□□□ -0.29
MCF2L-229ENST00000488765 SLC25A53Q5H9E4 307 aa13.25□□□□□ -0.29
MCF2L-229ENST00000488765 LEAP2Q969E1 77 aa13.25□□□□□ -0.29
MCF2L-229ENST00000488765 COL4A2P08572 1712 aa13.25□□□□□ -0.29
MCF2L-229ENST00000488765 PLXNB1O43157 2135 aa13.25□□□□□ -0.29
MCF2L-229ENST00000488765 C21orf140B9A014 251 aa13.25□□□□□ -0.29
MCF2L-229ENST00000488765 C9orf172C9J069 976 aa13.25□□□□□ -0.29
MCF2L-229ENST00000488765 A0A1W2PPM0 123 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 AREGP15514 252 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 EDDM3AQ14507 147 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 ARPC1AQ92747 370 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 C11orf52Q96A22 123 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 TXNDC17Q9BRA2 123 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 CHCHD2Q9Y6H1 151 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-229ENST00000488765 CUL9Q8IWT3 2517 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 TNFSF15O95150 251 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 COX8AP10176 69 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FABP2P12104 132 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 KCNIP1Q9NZI2 227 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 A6NDN8 102 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A10PA6NDY2 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A18PA6NE21 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A16PA6NEW6 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A20PA6NIJ5 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A8PA6NJQ4 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A7PA6NKC0 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A22PA8MWA6 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A12PA8MX19 464 aa13.24□□□□□ -0.29
MCF2L-229ENST00000488765 FAM90A5PA8MXJ8 464 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms