RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 IL22RA2Q969J5 263 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 GPR146Q96CH1 333 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 GALNT14Q96FL9 552 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 OR10C1Q96KK4 312 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 SMPXQ9UHP9 88 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 LYL1P12980 280 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 SUPT4H1P63272 117 aaKnown RBP13.24□□□□□ -0.29
ITGB1-215ENST00000488494 CASC10Q5T4H9 136 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 TOMM5Q8N4H5 51 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 TMEM116Q8NCL8 245 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 OR52E5Q8NH55 327 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 RNF2Q99496 336 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 RHPN1-AS1Q9BWJ2 59 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 GGTLC1Q9BX51 225 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 FNDC4Q9H6D8 234 aaPredicted RBP13.24□□□□□ -0.29
ITGB1-215ENST00000488494 MRPL36Q9P0J6 103 aaKnown RBP13.24□□□□□ -0.29
ITGB1-215ENST00000488494 UBQLN2Q9UHD9 624 aa13.24□□□□□ -0.29
ITGB1-215ENST00000488494 OR4C46A6NHA9 309 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 CEBPZOSA8MTT3 80 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 CHEK1O14757 476 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 SULT1A3P0DMM9 295 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 SULT1A4P0DMN0 295 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 HTR2BP41595 481 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 TMED4Q7Z7H5 227 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 CCDC190Q86UF4 302 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 HEYLQ9NQ87 328 aaPredicted RBP13.23□□□□□ -0.29
ITGB1-215ENST00000488494 KCNIP3Q9Y2W7 256 aa13.23□□□□□ -0.29
ITGB1-215ENST00000488494 STARD9Q9P2P6 4700 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 IGHV3OR16-13A0A075B7E8 117 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 IGHV3-74A0A0B4J1X5 117 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 ZNF701M0R085 212 aaPredicted RBP13.22□□□□□ -0.29
ITGB1-215ENST00000488494 SRPXP78539 464 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 ODF3L2Q3SX64 289 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 TOMM20LQ6UXN7 152 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 ZNF600Q6ZNG1 722 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 SLC24A4Q8NFF2 622 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 ZFAND3Q9H8U3 227 aa13.22□□□□□ -0.29
ITGB1-215ENST00000488494 PUS1Q9Y606 427 aaKnown RBP eCLIP13.22□□□□□ -0.29
ITGB1-215ENST00000488494 LOC102724200A0A096LPH7 203 aaPredicted RBP13.21□□□□□ -0.29
ITGB1-215ENST00000488494 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.29
ITGB1-215ENST00000488494 ANXA3P12429 323 aa13.21□□□□□ -0.29
ITGB1-215ENST00000488494 NMSQ5H8A3 153 aa13.21□□□□□ -0.29
ITGB1-215ENST00000488494 ZFAND6Q6FIF0 208 aa13.21□□□□□ -0.29
ITGB1-215ENST00000488494 IGKV3-7A0A075B6H7 116 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 A0A0B4J2A0 478 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 A0A1B0GU03 582 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 RPS10-NUDT3A0A1W2PQS6 291 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 CLN5O75503 358 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 TMEM50AO95807 157 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 TFPI2P48307 235 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 MLANAQ16655 118 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 SPANXN2Q5MJ10 180 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 LYZL2Q7Z4W2 148 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 LGI3Q8N145 548 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 OR4X1Q8NH49 305 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 SHPKQ9UHJ6 478 aa13.2□□□□□ -0.3
ITGB1-215ENST00000488494 IGHV3-66A0A0C4DH42 116 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 SCGB2A1O75556 95 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 NPY1RP25929 384 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 BMI1P35226 326 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 CCR6P51684 374 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 SMCO1Q147U7 214 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 C2orf83Q53S99 150 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 TMEM170AQ8WVE7 144 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 ST8SIA2Q92186 375 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 SRRQ9GZT4 340 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 RYR2Q92736 4967 aa13.19□□□□□ -0.3
ITGB1-215ENST00000488494 CSMD3Q7Z407 3707 aa13.18□□□□□ -0.3
ITGB1-215ENST00000488494 APOHP02749 345 aaPredicted RBP13.18□□□□□ -0.3
ITGB1-215ENST00000488494 VAMP1P23763 118 aa13.18□□□□□ -0.3
ITGB1-215ENST00000488494 RND2P52198 227 aa13.18□□□□□ -0.3
ITGB1-215ENST00000488494 TNFRSF9Q07011 255 aa13.18□□□□□ -0.3
ITGB1-215ENST00000488494 TCF24Q7RTU0 167 aa13.18□□□□□ -0.3
ITGB1-215ENST00000488494 RNASEH2CQ8TDP1 164 aaKnown RBP13.18□□□□□ -0.3
ITGB1-215ENST00000488494 HSPB7Q9UBY9 170 aa13.18□□□□□ -0.3
ITGB1-215ENST00000488494 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
ITGB1-215ENST00000488494 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 TIGITQ495A1 244 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 TMEM128Q5BJH2 165 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 FAM90A2PQ658T7 463 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 PRSS54Q6PEW0 395 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 DTD1Q8TEA8 209 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 DEDD2Q8WXF8 326 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 RBKSQ9H477 322 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 VSIRQ9H7M9 311 aa13.17□□□□□ -0.3
ITGB1-215ENST00000488494 DYNC2H1Q8NCM8 4307 aaKnown RBP13.17□□□□□ -0.3
ITGB1-215ENST00000488494 TENM2Q9NT68 2774 aa13.16□□□□□ -0.3
ITGB1-215ENST00000488494 SLC25A4P12235 298 aa13.16□□□□□ -0.3
ITGB1-215ENST00000488494 APOC4P55056 127 aa13.16□□□□□ -0.3
ITGB1-215ENST00000488494 APRG1Q8IVJ8 170 aa13.16□□□□□ -0.3
ITGB1-215ENST00000488494 OR1S1Q8NH92 325 aa13.16□□□□□ -0.3
ITGB1-215ENST00000488494 SLC25A21Q9BQT8 299 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-215ENST00000488494 TRAV30A0A087WSZ9 112 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 PIGBOS1A0A0B4J2F0 54 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 DUXBA0A1W2PPF3 345 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 IFNA10P01566 189 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
ITGB1-215ENST00000488494 OR10J1P30954 320 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms