RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ATP6V0BQ99437 205 aa12.1□□□□□ -0.47
C9orf3-219ENST00000488186 ELOVL1Q9BW60 279 aa12.1□□□□□ -0.47
C9orf3-219ENST00000488186 PSENENQ9NZ42 101 aa12.1□□□□□ -0.47
C9orf3-219ENST00000488186 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
C9orf3-219ENST00000488186 LSM5Q9Y4Y9 91 aaKnown RBP12.1□□□□□ -0.47
C9orf3-219ENST00000488186 NUPL2O15504 423 aaKnown RBP12.09□□□□□ -0.47
C9orf3-219ENST00000488186 TGOLN2O43493 480 aa12.09□□□□□ -0.47
C9orf3-219ENST00000488186 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-219ENST00000488186 SYNJ2BPP57105 145 aa12.09□□□□□ -0.47
C9orf3-219ENST00000488186 S100A10P60903 97 aa12.09□□□□□ -0.47
C9orf3-219ENST00000488186 C11orf87Q6NUJ2 197 aa12.09□□□□□ -0.47
C9orf3-219ENST00000488186 SPSB3Q6PJ21 355 aa12.09□□□□□ -0.47
C9orf3-219ENST00000488186 RAB40CQ96S21 281 aa12.09□□□□□ -0.47
C9orf3-219ENST00000488186 ALG5Q9Y673 324 aa12.09□□□□□ -0.47
C9orf3-219ENST00000488186 ZNF320A2RRD8 509 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 SEC14L6B5MCN3 397 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 SIX6O95475 246 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 MBPP02686 304 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-219ENST00000488186 SLC25A4P12235 298 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 CYCSP99999 105 aaKnown RBP12.08□□□□□ -0.48
C9orf3-219ENST00000488186 KLF5Q13887 457 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-219ENST00000488186 PVRIGQ6DKI7 326 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 C1QL4Q86Z23 238 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 SMIM8Q96KF7 97 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 OR4C12Q96R67 309 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 PEMTQ9UBM1 199 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 MGAT4CQ9UBM8 478 aa12.08□□□□□ -0.48
C9orf3-219ENST00000488186 C7orf66A4D0T2 115 aa12.07□□□□□ -0.48
C9orf3-219ENST00000488186 H3BP45 60 aa12.07□□□□□ -0.48
C9orf3-219ENST00000488186 RLN2P04090 185 aa12.07□□□□□ -0.48
C9orf3-219ENST00000488186 BCAP31P51572 246 aa12.07□□□□□ -0.48
C9orf3-219ENST00000488186 MLANAQ16655 118 aa12.07□□□□□ -0.48
C9orf3-219ENST00000488186 C9orf66Q5T8R8 295 aa12.07□□□□□ -0.48
C9orf3-219ENST00000488186 GPHB5Q86YW7 130 aa12.07□□□□□ -0.48
C9orf3-219ENST00000488186 MED28Q9H204 178 aa12.07□□□□□ -0.48
C9orf3-219ENST00000488186 RCL1Q9Y2P8 373 aaKnown RBP12.07□□□□□ -0.48
C9orf3-219ENST00000488186 IGHV3-35A0A0C4DH35 117 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 SAP30O75446 220 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 FCGR2BP31994 310 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-219ENST00000488186 GPX4P36969 197 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-219ENST00000488186 TAS2R30P59541 319 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 RELQ04864 619 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-219ENST00000488186 OXA1LQ15070 435 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 OXLD1Q5BKU9 147 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 OR9G4Q8NGQ1 327 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 OR4X1Q8NH49 305 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 SLC35E1Q96K37 410 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 NMES1Q9C002 83 aa12.06□□□□□ -0.48
C9orf3-219ENST00000488186 FNDC4Q9H6D8 234 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-219ENST00000488186 TRAV30A0A087WSZ9 112 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 C15orf62A8K5M9 175 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 K7EPK0 472 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 CLN5O75503 358 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 YIF1AO95070 293 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 CD69Q07108 199 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 SLC16A13Q7RTY0 426 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 CACNG8Q8WXS5 425 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 ACY3Q96HD9 319 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 CHRDL1Q9BU40 450 aa12.05□□□□□ -0.48
C9orf3-219ENST00000488186 G3V4G9 280 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 TSC22D2O75157 780 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 TMEM50AO95807 157 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 CTSGP08311 255 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 INSL3P51460 131 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 RND2P52198 227 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 RAB32Q13637 225 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 OR8G2PQ6IF36 304 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 PRSS54Q6PEW0 395 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 NPIPB3Q92617 1050 aa12.04□□□□□ -0.48
C9orf3-219ENST00000488186 ZMAT5Q9UDW3 170 aaKnown RBP12.04□□□□□ -0.48
C9orf3-219ENST00000488186 F8W735 103 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-219ENST00000488186 LGALS9O00182 355 aa12.03□□□□□ -0.48
C9orf3-219ENST00000488186 NDUFA4O00483 81 aa12.03□□□□□ -0.48
C9orf3-219ENST00000488186 CAV2P51636 162 aa12.03□□□□□ -0.48
C9orf3-219ENST00000488186 PAX9P55771 341 aa12.03□□□□□ -0.48
C9orf3-219ENST00000488186 LRRC37A5PQ49AS3 106 aa12.03□□□□□ -0.48
C9orf3-219ENST00000488186 KPRPQ5T749 579 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-219ENST00000488186 C20orf24Q9BUV8 137 aa12.03□□□□□ -0.48
C9orf3-219ENST00000488186 UFC1Q9Y3C8 167 aa12.03□□□□□ -0.48
C9orf3-219ENST00000488186 METTL15P1P0C7V9 234 aa12.02□□□□□ -0.49
C9orf3-219ENST00000488186 OR10J1P30954 320 aa12.02□□□□□ -0.49
C9orf3-219ENST00000488186 H2BFSP57053 126 aa12.02□□□□□ -0.49
C9orf3-219ENST00000488186 SAMD5Q5TGI4 173 aa12.02□□□□□ -0.49
C9orf3-219ENST00000488186 REC114Q7Z4M0 266 aa12.02□□□□□ -0.49
C9orf3-219ENST00000488186 TMEM116Q8NCL8 245 aa12.02□□□□□ -0.49
C9orf3-219ENST00000488186 OR10P1Q8NGE3 313 aa12.02□□□□□ -0.49
C9orf3-219ENST00000488186 OR1S2Q8NGQ3 325 aa12.02□□□□□ -0.49
C9orf3-219ENST00000488186 ZNF436Q9C0F3 470 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-219ENST00000488186 SMCO3A2RU48 225 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 ZFP92A6NM28 416 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 PET100P0DJ07 73 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 ADMP35318 185 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 IL15RAQ13261 267 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 GAMTQ14353 236 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 ZNF600Q6ZNG1 722 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 DYNLRB2Q8TF09 96 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
C9orf3-219ENST00000488186 MEGF8Q7Z7M0 2845 aa12.01□□□□□ -0.49
C9orf3-219ENST00000488186 WIPF1O43516 503 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms