RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CCDC140Q96MF4 163 aa8.21□□□□□ -1.1
TOP3B-216ENST00000487485 RAB40CQ96S21 281 aa8.21□□□□□ -1.1
TOP3B-216ENST00000487485 NMES1Q9C002 83 aa8.21□□□□□ -1.1
TOP3B-216ENST00000487485 MED28Q9H204 178 aa8.21□□□□□ -1.1
TOP3B-216ENST00000487485 C21orf62Q9NYP8 219 aa8.21□□□□□ -1.1
TOP3B-216ENST00000487485 PSENENQ9NZ42 101 aa8.21□□□□□ -1.1
TOP3B-216ENST00000487485 PAIP2BQ9ULR5 123 aaKnown RBP8.21□□□□□ -1.1
TOP3B-216ENST00000487485 RCL1Q9Y2P8 373 aaKnown RBP8.21□□□□□ -1.1
TOP3B-216ENST00000487485 LSM5Q9Y4Y9 91 aaKnown RBP8.21□□□□□ -1.1
TOP3B-216ENST00000487485 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.1
TOP3B-216ENST00000487485 TENM2Q9NT68 2774 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 C15orf62A8K5M9 175 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 H3BP45 60 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 L7N2F9 121 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 TMEM50AO95807 157 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 IFNA4P05014 189 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 CXCL3P19876 107 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 GPR183P32249 361 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 ARL3P36405 182 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 SLURP1P55000 103 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 MFAP4P55083 255 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 S100A10P60903 97 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 RAB11AP62491 216 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 VAMP2P63027 116 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 RAB32Q13637 225 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 FCN2Q15485 313 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 Q56UQ5 140 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 LINC00482Q8N8I6 264 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 UBAC2Q8NBM4 344 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 WDR89Q96FK6 387 aaPredicted RBP8.2□□□□□ -1.1
TOP3B-216ENST00000487485 OR4C12Q96R67 309 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 ATP6V0BQ99437 205 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 FNDC4Q9H6D8 234 aaPredicted RBP8.2□□□□□ -1.1
TOP3B-216ENST00000487485 ZC4H2Q9NQZ6 224 aa8.2□□□□□ -1.1
TOP3B-216ENST00000487485 STRAPQ9Y3F4 350 aaKnown RBP8.2□□□□□ -1.1
TOP3B-216ENST00000487485 RPS10-NUDT3A0A1W2PQS6 291 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 OR2T8A6NH00 312 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 F8W735 103 aaPredicted RBP8.19□□□□□ -1.1
TOP3B-216ENST00000487485 BMPR1BO00238 502 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 GGCTO75223 188 aaKnown RBP8.19□□□□□ -1.1
TOP3B-216ENST00000487485 IGLL1P15814 213 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 CD33P20138 364 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 ZP3P21754 424 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 HOXD3P31249 432 aaPredicted RBP8.19□□□□□ -1.1
TOP3B-216ENST00000487485 TAS2R30P59541 319 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 RRAS2P62070 204 aaPredicted RBP8.19□□□□□ -1.1
TOP3B-216ENST00000487485 RPEL1Q2QD12 228 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 DEFB121Q5J5C9 76 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 ETFRF1Q6IPR1 90 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 ACSM6Q6P461 480 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 WFDC9Q8NEX5 89 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 DCUN1D4Q92564 292 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 DLX4Q92988 240 aaPredicted RBP8.19□□□□□ -1.1
TOP3B-216ENST00000487485 TXN2Q99757 166 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 STAB2Q8WWQ8 2551 aa8.19□□□□□ -1.1
TOP3B-216ENST00000487485 DYNC2H1Q8NCM8 4307 aaKnown RBP8.18□□□□□ -1.1
TOP3B-216ENST00000487485 WI2-2373I1.2A0A1W2PRP0 233 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 TGOLN2O43493 480 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 GNG7O60262 68 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 TSC22D2O75157 780 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 OR2C1O95371 312 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 RLN2P04090 185 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 SLC25A4P12235 298 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 PVALBP20472 110 aaPredicted RBP8.18□□□□□ -1.1
TOP3B-216ENST00000487485 FCGR2BP31994 310 aaPredicted RBP8.18□□□□□ -1.1
TOP3B-216ENST00000487485 NPBWR1P48145 328 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 BCAP31P51572 246 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 CD69Q07108 199 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 KLF5Q13887 457 aaPredicted RBP8.18□□□□□ -1.1
TOP3B-216ENST00000487485 LRRC37A5PQ49AS3 106 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 OR11H7Q8NGC8 314 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 PPP1R1CQ8WVI7 109 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 BSCL2Q96G97 398 aaPredicted RBP8.18□□□□□ -1.1
TOP3B-216ENST00000487485 WWC2-AS2Q96NR7 200 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 C11orf1Q9H5F2 150 aa8.18□□□□□ -1.1
TOP3B-216ENST00000487485 GAR1Q9NY12 217 aaKnown RBP8.18□□□□□ -1.1
TOP3B-216ENST00000487485 MRPL36Q9P0J6 103 aaKnown RBP8.18□□□□□ -1.1
TOP3B-216ENST00000487485 PMS2P5A8MQ11 134 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 OVOL1O14753 267 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 CLN5O75503 358 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 DEDDO75618 318 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 CTSGP08311 255 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 ADMP35318 185 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 GPX4P36969 197 aaPredicted RBP8.17□□□□□ -1.1
TOP3B-216ENST00000487485 KRTAP10-11P60412 298 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 PRSS54Q6PEW0 395 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 SPSB3Q6PJ21 355 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 GPHB5Q86YW7 130 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 OR4X1Q8NH49 305 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 CHRDL1Q9BU40 450 aa8.17□□□□□ -1.1
TOP3B-216ENST00000487485 IGHV3-35A0A0C4DH35 117 aa8.16□□□□□ -1.1
TOP3B-216ENST00000487485 FAM24AA6NFZ4 105 aa8.16□□□□□ -1.1
TOP3B-216ENST00000487485 PRSS46E5RG02 174 aa8.16□□□□□ -1.1
TOP3B-216ENST00000487485 H0YIZ8 118 aa8.16□□□□□ -1.1
TOP3B-216ENST00000487485 NUPL2O15504 423 aaKnown RBP8.16□□□□□ -1.1
TOP3B-216ENST00000487485 MPC2O95563 127 aa8.16□□□□□ -1.1
TOP3B-216ENST00000487485 METTL15P1P0C7V9 234 aa8.16□□□□□ -1.1
TOP3B-216ENST00000487485 CAV2P51636 162 aa8.16□□□□□ -1.1
TOP3B-216ENST00000487485 RND2P52198 227 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms