RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 EEF1E1O43324 174 aaKnown RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 GSTZ1O43708 216 aaPredicted RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 PDE6DO43924 150 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 CFDP00746 253 aaPredicted RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 PMP2P02689 132 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 HTR1AP08908 422 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 SFTA3P0C7M3 94 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 SMIM17P0DL12 118 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 SLC25A4P12235 298 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 COL8A2P25067 703 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 BRS3P32247 399 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 GUCA1AP43080 201 aaPredicted RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 MARCKSL1P49006 195 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 SULT1A2P50226 295 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 POLR2HP52434 150 aaKnown RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 POLR2JP52435 117 aaKnown RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 CLDN12P56749 244 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TCTAP57738 103 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR4D2P58180 307 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 CKS1BP61024 79 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 UBE2KP61086 200 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 MAXP61244 160 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 LSM6P62312 80 aaKnown RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 CCL7P80098 99 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 BATFQ16520 125 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 ARHGAP11BQ3KRB8 267 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OCIAD2Q56VL3 154 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 SDHAF4Q5VUM1 108 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 GLT8D1Q68CQ7 371 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 ZNF660Q6AZW8 331 aaPredicted RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR2T2Q6IF00 324 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TMPPEQ6ZT21 453 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TCF24Q7RTU0 167 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 GLT6D1Q7Z4J2 308 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 NIT1Q86X76 327 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 AMN1Q8IY45 258 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST3H2BBQ8N257 126 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 ZNF664Q8N3J9 261 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TCTEX1D1Q8N7M0 179 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR11H1Q8NG94 326 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR4B1Q8NGF8 309 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR5D16Q8NGK9 328 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR2Y1Q8NGV0 311 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR11H2Q8NH07 326 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR2AE1Q8NHA4 323 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 MFSD8Q8NHS3 518 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 ACTL9Q8TC94 416 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TWIST2Q8WVJ9 160 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 RNF133Q8WVZ7 376 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 PSMF1Q92530 271 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TMEM106AQ96A25 262 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR7D2Q96RA2 312 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 SIGMAR1Q99720 223 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 PSMG3Q9BT73 122 aaPredicted RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 VAMP8Q9BV40 100 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 OR2J1Q9GZK6 312 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 EIF5A2Q9GZV4 153 aaKnown RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 SLC25A31Q9H0C2 315 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TCEAL2Q9H3H9 227 aaPredicted RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TAF9BQ9HBM6 251 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 HRASLSQ9HDD0 168 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 MS4A12Q9NXJ0 267 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 FKBP11Q9NYL4 201 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 DOK5Q9P104 306 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 UQCR10Q9UDW1 63 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 NAT8Q9UHE5 227 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TRAPPC2LQ9UL33 140 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 R4GN34 69 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 LRRC37A3O60309 1634 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 LRP6O75581 1613 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 CICQ96RK0 1608 aaPredicted RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 ZFC3H1O60293 1989 aaKnown RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 TMEM131Q92545 1883 aa1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 SIPA1L3O60292 1781 aaPredicted RBP1.75□□□□□ -2.13
SNRNP27-204ENST00000487029 QSER1Q2KHR3 1735 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 UBR1Q8IWV7 1749 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 NWD2Q9ULI1 1742 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 CITO14578 2027 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 FLT4P35916 1363 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 ERCC6L2Q5T890 1561 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 DIP2BQ9P265 1576 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 IGKV1OR2-108A0A075B7D4 117 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 BORCS7-ASMTA0A0B4J1R7 106 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 IGHV3-21A0A0B4J1V1 117 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 A0A1B0GTI1 187 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 TRDV1A0A1B0GX56 115 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 A0A1W2PNN7 141 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 MEIS3P1A6NDR6 274 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 ARRDC5A6NEK1 342 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 UMAD1C9J7I0 102 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 E7EQ34 232 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 H3BQ85 93 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 C15orf65H3BRN8 121 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 GABARAPH6UMI1 98 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 FGF16O43320 207 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 ARL6IP5O75915 188 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 ZNF682O95780 498 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 IGF2P01344 180 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 IGLV6-57P01721 117 aa1.74□□□□□ -2.13
SNRNP27-204ENST00000487029 IGKV5-2P06315 115 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms