RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 C9orf66Q5T8R8 295 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 SLC25A24Q6NUK1 477 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 ZNF546Q86UE3 836 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 ZNF114Q8NC26 417 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 OR11H4Q8NGC9 324 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 MYOZ3Q8TDC0 251 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 TMEM170AQ8WVE7 144 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 MISP3Q96FF7 219 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 ZC4H2Q9NQZ6 224 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 ARPC5O15511 151 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 SOX15O60248 233 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 IFNA4P05014 189 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 NUP62P37198 522 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 MFAP2P55001 183 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 RAB11AP62491 216 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 DEFA5Q01523 94 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 C2orf83Q53S99 150 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 TMEM252Q8N6L7 170 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 OR1P1Q8NH06 330 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 DMRT1Q9Y5R6 373 aa11.92□□□□□ -0.5
SEMA4D-219ENST00000486935 I3L521 148 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 CYB5BO43169 146 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 CST7O76096 145 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 RPL12P30050 165 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 EWSR1Q01844 656 aaKnown RBP eCLIP11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 FHL3Q13643 280 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 OR8G2PQ6IF36 304 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 TMEM14EPQ6UXP3 125 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 NOXA1Q86UR1 476 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 STX12Q86Y82 276 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 INO80EQ8NBZ0 244 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 PINX1Q96BK5 328 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 PRR25Q96S07 402 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 SLC25A31Q9H0C2 315 aa11.91□□□□□ -0.5
SEMA4D-219ENST00000486935 IGLV11-55A0A075B6I3 123 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 OR2J3O76001 311 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 TRGV3P03979 118 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 AP2S1P53680 142 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 ATP5IP56385 69 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 RUNX1Q01196 453 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 ZNF616Q08AN1 781 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 HAPLN4Q86UW8 402 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 TMEM217Q8N7C4 229 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 OR1L6Q8NGR2 347 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 TNFSF18Q9UNG2 199 aa11.9□□□□□ -0.5
SEMA4D-219ENST00000486935 DNAH9Q9NYC9 4486 aa11.9□□□□□ -0.51
SEMA4D-219ENST00000486935 IGHV3-21A0A0B4J1V1 117 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 CORTO00230 105 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 HIST1H1BP16401 226 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 OPRK1P41145 380 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 SULT1A1P50225 295 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 TPPP2P59282 170 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 RHOGP84095 191 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 NHLH2Q02577 135 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 HYLS1Q96M11 299 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 FANCD2OSQ96PS1 177 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 FBXL7Q9UJT9 491 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 HSPB11Q9Y547 144 aa11.89□□□□□ -0.51
SEMA4D-219ENST00000486935 COL7A1Q02388 2944 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 RNF222A6NCQ9 220 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 PMS2P5A8MQ11 134 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 HMSDA8MTL9 139 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 H3BUA1 57 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 EIF2B2P49770 351 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 NKX2-5P52952 324 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 ARL16Q0P5N6 197 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 OR10P1Q8NGE3 313 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 RNASEH2CQ8TDP1 164 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 BSCL2Q96G97 398 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 AQP10Q96PS8 301 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 MFFQ9GZY8 342 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 THYN1Q9P016 225 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 S4R3C0 116 aa11.88□□□□□ -0.51
SEMA4D-219ENST00000486935 NDUFB8O95169 186 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 MT-CO2P00403 227 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 BAXQ07812 192 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 SLC38A11Q08AI6 406 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 EXOSC2Q13868 293 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 MLANAQ16655 118 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 PVRIGQ6DKI7 326 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 ACOT7LQ6ZUV0 252 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 SLC16A13Q7RTY0 426 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 OR1S2Q8NGQ3 325 aa11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 LSM4Q9Y4Z0 139 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-219ENST00000486935 TRBV9A0A0B4J1U6 114 aa11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 RPS10-NUDT3A0A1W2PQS6 291 aa11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 SMCO3A2RU48 225 aa11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 PRSS46E5RG02 174 aa11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 I3L2K1 104 aa11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 OVOL1O14753 267 aa11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 SCAF4O95104 1147 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 IGHV3-23P01764 117 aa11.86□□□□□ -0.51
SEMA4D-219ENST00000486935 HNRNPCP07910 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms