RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 TRNP1Q6NT89 227 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 HRCT1Q6UXD1 115 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 SSX8Q7RTT4 187 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 ZNF329Q86UD4 541 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 BAGE3Q86Y29 109 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 BAGE2Q86Y30 109 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 GAPTQ8N292 157 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 NPWQ8N729 165 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 TPRX1Q8N7U7 411 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 SUMF1Q8NBK3 374 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 OR2AJ1Q8NGZ0 328 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 OR9G1Q8NH87 305 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 OTOSQ8NHW6 89 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 PPDPFLQ8WWR9 84 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 FGF14Q92915 247 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 LSM10Q969L4 123 aaKnown RBP4.34□□□□□ -1.71
COPS3-209ENST00000486810 ELSPBP1Q96BH3 223 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 DPH3Q96FX2 82 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 TIMD4Q96H15 378 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 ZNF670Q9BS34 389 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 EDA2RQ9HAV5 297 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 RETNQ9HD89 108 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 SCRT2Q9NQ03 307 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 C21orf62Q9NYP8 219 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 LRRC37A3O60309 1634 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 ADAMTS7Q9UKP4 1686 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 ROBO1Q9Y6N7 1651 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 RICTORQ6R327 1708 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 MED12LQ86YW9 2145 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 TMEM131Q92545 1883 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 SIP14410 1827 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 TMED7-TICAM2A0A0A6YYA0 188 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 RIIAD1A6NNX1 92 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 SHISA9B4DS77 424 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 E9PLD3 99 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 C11orf98E9PRG8 122 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 SLC17A2O00624 439 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 SPINT2O43291 252 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 SNCGO76070 127 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 APOMO95445 188 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 OXTP01178 125 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 IGHV3-7P01780 117 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 PRH1P02810 166 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 COX8AP10176 69 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 CPMP14384 443 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 IGFBP3P17936 291 aaPredicted RBP4.33□□□□□ -1.72
COPS3-209ENST00000486810 IL3RAP26951 378 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 FCGR2CP31995 323 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 PPP1CCP36873 323 aaKnown RBP4.33□□□□□ -1.72
COPS3-209ENST00000486810 PSMB3P49720 205 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 CEACAM16Q2WEN9 425 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 PSMG4Q5JS54 123 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 LCN12Q6JVE5 192 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 TMEM14EPQ6UXP3 125 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 SLC25A48Q6ZT89 311 aaKnown RBP4.33□□□□□ -1.72
COPS3-209ENST00000486810 KCNS1Q96KK3 526 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 CLEC7AQ9BXN2 247 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 ULBP3Q9BZM4 244 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 IKZF5Q9H5V7 419 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 VSIG4Q9Y279 399 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 PKIGQ9Y2B9 76 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 ZNF835Q9Y2P0 537 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 CHCHD2Q9Y6H1 151 aaPredicted RBP4.33□□□□□ -1.72
COPS3-209ENST00000486810 DOCK6Q96HP0 2047 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 CASP8AP2Q9UKL3 1982 aa4.33□□□□□ -1.72
COPS3-209ENST00000486810 KMT2EQ8IZD2 1858 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 ARID2Q68CP9 1835 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 ADAMTSL1Q8N6G6 1762 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 TRBV20-1A0A075B6N2 111 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 FAM236DA0A1B0GTK5 79 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 A0A1W2PS18 150 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 EEF1E1-BLOC1S5C9J1V9 151 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 J3QRE1 110 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 DPM2O94777 84 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 IGKV3-20P01619 116 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 MT-ND6P03923 174 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 ZNF688P0C7X2 276 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 CECR9P0C854 216 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 FAM236CP0DP71 79 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 CRYGAP11844 174 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 GATA1P15976 413 aaPredicted RBP4.32□□□□□ -1.72
COPS3-209ENST00000486810 PSMB8P28062 276 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 RPL13AP40429 203 aaKnown RBP4.32□□□□□ -1.72
COPS3-209ENST00000486810 TMEM258P61165 79 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 CCL20P78556 96 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 PLGLB1Q02325 96 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 ZNF90Q03938 601 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 STPG1Q5TH74 334 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 NCBP2-AS2Q69YL0 99 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 LCN10Q6JVE6 187 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 MFSD12Q6NUT3 480 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 ZNF550Q7Z398 422 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 MOB3BQ86TA1 216 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 BPIFA4PQ86YQ2 179 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 SGPP2Q8IWX5 399 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 SLC25A45Q8N413 288 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 NUP35Q8NFH5 326 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 BMFQ96LC9 184 aa4.32□□□□□ -1.72
COPS3-209ENST00000486810 IMUPQ9GZP8 106 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms