RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CENPWQ5EE01 88 aa10.86□□□□□ -0.67
HMGN1-216ENST00000486741 GGTLC1Q9BX51 225 aa10.86□□□□□ -0.67
HMGN1-216ENST00000486741 CLEC5AQ9NY25 188 aa10.86□□□□□ -0.67
HMGN1-216ENST00000486741 K7ENP7 123 aa10.86□□□□□ -0.67
HMGN1-216ENST00000486741 Q6ZN92 141 aa10.86□□□□□ -0.67
HMGN1-216ENST00000486741 TRAV5A0A0B4J249 113 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 CXCL1P09341 107 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 SELENOTP62341 195 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
HMGN1-216ENST00000486741 IGFL2Q6UWQ7 119 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-216ENST00000486741 C1RLQ9NZP8 487 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 DPM3Q9P2X0 92 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 PYYP10082 97 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 GRNP28799 593 aaKnown RBP10.85□□□□□ -0.67
HMGN1-216ENST00000486741 EFNB3Q15768 340 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 GTF2H5Q6ZYL4 71 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 HAPLN4Q86UW8 402 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 MBD3L1Q8WWY6 194 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 PITPNC1Q9UKF7 332 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 CBLN1P23435 193 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 KLRD1Q13241 179 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 TMEM183BQ1AE95 376 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 CCDC144NLQ6NUI1 221 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 TBX15Q96SF7 602 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 SLC25A33Q9BSK2 321 aa10.85□□□□□ -0.67
HMGN1-216ENST00000486741 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 A1L4Q6 167 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 P01737 135 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 LY6EQ16553 131 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 TMEM144Q7Z5S9 345 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 SFRP2Q96HF1 295 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 IMMP2LQ96T52 175 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 ARL2-SNX15V9GYD0 113 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 MYO18BQ8IUG5 2567 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 FOXH1O75593 365 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 TPPP2P59282 170 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 GSX1Q9H4S2 264 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-216ENST00000486741 ATG2AQ2TAZ0 1938 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 C15orf65H3BRN8 121 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 WNT2P09544 360 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 UNQ5815/PRO19632Q6UWF5 114 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 MGST2Q99735 147 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 ARL3P36405 182 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 GPX4P36969 197 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-216ENST00000486741 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
HMGN1-216ENST00000486741 NOL4LQ96MY1 436 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-216ENST00000486741 CELSR3Q9NYQ7 3312 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 TIMM23O14925 209 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 ELOBQ15370 118 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 CHRDL1Q9BU40 450 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 IL4P05112 153 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 IGHV1-8P0DP01 117 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 PLA2G5P39877 138 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 DIAPH2-AS1Q14236 149 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 C17orf58Q2M2W7 97 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 TMEM30BQ3MIR4 351 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 VN1R17PQ8TDU5 208 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 NDFIP1Q9BT67 221 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 M0QZK8 103 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 GGCTO75223 188 aaKnown RBP10.83□□□□□ -0.68
HMGN1-216ENST00000486741 OR2J3O76001 311 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 NBL1P41271 181 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 LBHQ53QV2 105 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-216ENST00000486741 PRR31Q5SQ13 230 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 FAM169BQ8N8A8 192 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 STXBP6Q8NFX7 210 aa10.83□□□□□ -0.68
HMGN1-216ENST00000486741 FOXA2Q9Y261 457 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-216ENST00000486741 SFTPCP11686 197 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 ATP5J2P56134 94 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 KLF17Q5JT82 389 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-216ENST00000486741 KLHDC1Q8N7A1 406 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 NUP37Q8NFH4 326 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 TCF23Q7RTU1 214 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 PPP1R27Q86WC6 154 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 CD69Q07108 199 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 C22orf34Q6ZV56 151 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 OR4A5Q8NH83 315 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 SRSF12Q8WXF0 261 aaKnown RBP10.82□□□□□ -0.68
HMGN1-216ENST00000486741 WNT10AQ9GZT5 417 aa10.82□□□□□ -0.68
HMGN1-216ENST00000486741 ZNF726P1Q15940 193 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 RNASE7Q9H1E1 156 aaKnown RBP10.81□□□□□ -0.68
HMGN1-216ENST00000486741 NAGKQ9UJ70 344 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 MSRB2Q9Y3D2 182 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 IGHV2-26A0A0B4J1V2 119 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 GNG5P63218 68 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 SLC25A48Q6ZT89 311 aaKnown RBP10.81□□□□□ -0.68
HMGN1-216ENST00000486741 IGFBPL1Q8WX77 278 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 BET1LQ9NYM9 111 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 IGLV3-9A0A075B6K5 115 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 IGHV3-66A0A0C4DH42 116 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 NBEAP1P0C6P0 100 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 FAM106CPP0CH98 169 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 COL5A1-AS1Q5SY13 56 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 GOLT1AQ6ZVE7 132 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 OCC1Q8TAD7 63 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 CD81P60033 236 aa10.81□□□□□ -0.68
HMGN1-216ENST00000486741 TXNDC17Q9BRA2 123 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms