RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PTRHD1Q6GMV3 140 aaKnown RBP0.75□□□□□ -2.29
LTN1-206ENST00000486427 PHF13Q86YI8 300 aaPredicted RBP0.75□□□□□ -2.29
LTN1-206ENST00000486427 MED12LQ86YW9 2145 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 OR4E2Q8NGC2 313 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 OR5A1Q8NGJ0 315 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 ARL5BQ96KC2 179 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 ERGIC3Q9Y282 383 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 EXPH5Q8NEV8 1989 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 ADCY9O60503 1353 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 ROBO3Q96MS0 1386 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 TRAV1-1A0A0B4J248 108 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 OR4C46A6NHA9 309 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 CLDN24A6NM45 220 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 TTRP02766 147 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 SMIM10L2AP0DMW4 78 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 SMIM10L2BP0DMW5 78 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 RHEBQ15382 184 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 KHDC3LQ587J8 217 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 SPOPLQ6IQ16 392 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 DPPA3Q6W0C5 159 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 HIST3H2BBQ8N257 126 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 CLDN22Q8N7P3 220 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 DNAJC9Q8WXX5 260 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 MRPL57Q9BQC6 102 aaKnown RBP0.74□□□□□ -2.29
LTN1-206ENST00000486427 SLC39A9Q9NUM3 307 aa0.74□□□□□ -2.29
LTN1-206ENST00000486427 TCL1BO95988 128 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 SSR2P43308 183 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 DCUN1D1Q96GG9 259 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 C8orf76Q96K31 380 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 OBSCN-AS1Q96MR7 158 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 TMEM147Q9BVK8 224 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 ULBP3Q9BZM4 244 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 TAS2R4Q9NYW5 299 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 DOCK5Q9H7D0 1870 aa0.73□□□□□ -2.29
LTN1-206ENST00000486427 ADGRB2O60241 1585 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 TRBV6-7A0A0A0MS04 114 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 FAM236DA0A1B0GTK5 79 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 SMIM23A6NLE4 172 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 KPNA3O00505 521 aaPredicted RBP0.72□□□□□ -2.29
LTN1-206ENST00000486427 OR2B3O76000 313 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 BAALC-AS2P0C853 105 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 FAM236CP0DP71 79 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 DEFA1P59665 94 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 RAB4BP61018 213 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 C12orf45Q8N5I9 185 aaPredicted RBP0.72□□□□□ -2.29
LTN1-206ENST00000486427 OR52R1Q8NGF1 315 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 ZNF418Q8TF45 676 aaPredicted RBP0.72□□□□□ -2.29
LTN1-206ENST00000486427 DCSTAMPQ9H295 470 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 PARVGQ9HBI0 331 aa0.72□□□□□ -2.29
LTN1-206ENST00000486427 IGKV1-9A0A0C4DH69 117 aa0.71□□□□□ -2.3
LTN1-206ENST00000486427 HYPMO75409 117 aa0.71□□□□□ -2.3
LTN1-206ENST00000486427 CRYZL1O95825 349 aa0.71□□□□□ -2.3
LTN1-206ENST00000486427 ZNF93P35789 620 aaPredicted RBP0.71□□□□□ -2.3
LTN1-206ENST00000486427 RHOGP84095 191 aa0.71□□□□□ -2.3
LTN1-206ENST00000486427 LINC01554Q52M75 96 aa0.71□□□□□ -2.3
LTN1-206ENST00000486427 OR8J2Q8NGG1 315 aa0.71□□□□□ -2.3
LTN1-206ENST00000486427 LINC00526Q96FQ7 95 aa0.71□□□□□ -2.3
LTN1-206ENST00000486427 KLK9Q9UKQ9 250 aa0.71□□□□□ -2.3
LTN1-206ENST00000486427 PLB1Q6P1J6 1458 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 TRAV12-1A0A0B4J245 112 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 PIRO00625 290 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 LYZL6O75951 148 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 UBL3O95164 117 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 CNIH1O95406 144 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 RBP1P09455 135 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 OMPP47874 163 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 IAH1Q2TAA2 248 aaPredicted RBP0.7□□□□□ -2.3
LTN1-206ENST00000486427 TRAPPC5Q8IUR0 188 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 CCDC42Q96M95 316 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 HS3ST2Q9Y278 367 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 ZFP30Q9Y2G7 519 aa0.7□□□□□ -2.3
LTN1-206ENST00000486427 NCOA6Q14686 2063 aaPredicted RBP0.69□□□□□ -2.3
LTN1-206ENST00000486427 A0A087WUJ7 227 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 M0R2N4 97 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 LYPLA2O95372 231 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 RANP62826 216 aaKnown RBP0.69□□□□□ -2.3
LTN1-206ENST00000486427 C12orf74Q32Q52 190 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 RNASE10Q5GAN6 216 aaKnown RBP0.69□□□□□ -2.3
LTN1-206ENST00000486427 TRAPPC6BQ86SZ2 158 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 OOSP2Q86WS3 158 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 Q8N814 137 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 OR13D1Q8NGV5 346 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 OR10J5Q8NHC4 309 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 GPR146Q96CH1 333 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 OSTCQ9NRP0 149 aa0.69□□□□□ -2.3
LTN1-206ENST00000486427 PIK3C2GO75747 1445 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 SBF1O95248 1867 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 ZNF682O95780 498 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 MGST1P10620 155 aaKnown RBP0.68□□□□□ -2.3
LTN1-206ENST00000486427 LSM6P62312 80 aaKnown RBP0.68□□□□□ -2.3
LTN1-206ENST00000486427 CNBPP62633 177 aaKnown RBP0.68□□□□□ -2.3
LTN1-206ENST00000486427 OR6V1Q8N148 313 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 SFT2D1Q8WV19 159 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 BORCS7Q96B45 105 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 CMSS1Q9BQ75 279 aaKnown RBP0.68□□□□□ -2.3
LTN1-206ENST00000486427 CYSLTR1Q9Y271 337 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 ECM29Q5VYK3 1845 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 LAMB4A4D0S4 1761 aa0.68□□□□□ -2.3
LTN1-206ENST00000486427 ZNF106Q9H2Y7 1883 aaKnown RBP0.67□□□□□ -2.3
LTN1-206ENST00000486427 MED1Q15648 1581 aaPredicted RBP0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms