RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 OR13C8Q8NGS7 320 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 TERB2Q8NHR7 220 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 LYPD6BQ8NI32 183 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 RTN4IP1Q8WWV3 396 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 CPNE2Q96FN4 548 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 C2orf50Q96LR7 162 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 OR4C12Q96R67 309 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 LINC00574Q9H8X3 128 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 RHOFQ9HBH0 211 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 RETNQ9HD89 108 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 ZNF581Q9P0T4 197 aa4.93□□□□□ -1.62
TMEM39A-209ENST00000486235 TRAV41A0A0B4J266 112 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 RBMY1BA6NDE4 496 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 C5orf51A6NDU8 294 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 CXorf65A6NEN9 183 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 RBMY1EA6NEQ0 496 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 PCP4L1A6NKN8 68 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 GPR31O00270 319 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 SDCBPO00560 298 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 SLC31A2O15432 143 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 NUPL2O15504 423 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 SFT2D2O95562 160 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 IGHV3-11P01762 117 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 FABP1P07148 127 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 OR8U9P0C7N5 309 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 RBMY1DP0C7P1 496 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 SEC11BP0C7V7 166 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 SPP1P10451 314 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 RCC1P18754 421 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 POLR2GP62487 172 aaKnown RBP eCLIP4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 PPP1R1AQ13522 171 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 MMDQ15546 238 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 HAGHQ16775 308 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 ECSCRQ19T08 205 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 VWC2Q2TAL6 325 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 PIGYQ3MUY2 71 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 SCGB2B2Q4G0G5 96 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 FAAP20Q6NZ36 180 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 LYPD6Q86Y78 171 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 SAXO1Q8IYX7 474 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 UBAC2Q8NBM4 344 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 OR10A7Q8NGE5 316 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 OR56B1Q8NGI3 324 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 OR51A4Q8NGJ6 313 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 OR13C3Q8NGS6 347 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 KCNG3Q8TAE7 436 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 ABHD14BQ96IU4 210 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 FAM110AQ9BQ89 295 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 URM1Q9BTM9 101 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 TOLLIPQ9H0E2 274 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 HIPK2Q9H2X6 1198 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 TAF9BQ9HBM6 251 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 TMED3Q9Y3Q3 217 aa4.92□□□□□ -1.62
TMEM39A-209ENST00000486235 IGHV7-81A0A0B4J1V7 117 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 A0A1W2PN81 502 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 FAM90A10PA6NDY2 464 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 COLCA2A8K830 154 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 UMAD1C9J7I0 102 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 C15orf65H3BRN8 121 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 HSPA12AO43301 675 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 SOX15O60248 233 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 IFNA10P01566 189 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 IFNA21P01568 189 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 FCGR3AP08637 254 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 LGALS1P09382 135 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 SFTA3P0C7M3 94 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 PGAM2P15259 253 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 CNTFRP26992 372 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 BLVRBP30043 206 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 CHRNA7P36544 502 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 RAB4BP61018 213 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 RAB2AP61019 212 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 SRPXP78539 464 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 NDPQ00604 133 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 PLA2G7Q13093 441 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 RSU1Q15404 277 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 KISS1Q15726 138 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 FAM74A1Q5RGS3 127 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 BTNL8Q6UX41 500 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 JAGN1Q8N5M9 183 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 LINC00311Q8N616 119 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 SUMF2Q8NBJ7 301 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 OR10V1Q8NGI7 309 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 OR10R2Q8NGX6 335 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 OR4K15Q8NH41 348 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 OCC1Q8TAD7 63 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 RXFP4Q8TDU9 374 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 C5orf30Q96GV9 206 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 RITA1Q96K30 269 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 SULT4A1Q9BR01 284 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 CST11Q9H112 138 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 NCOR1P1Q9H4R4 102 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 GPR132Q9UNW8 380 aa4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 C14orf166Q9Y224 244 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 MRPS28Q9Y2Q9 187 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-209ENST00000486235 A0A087WWC5 75 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM30CPA0ZSE6 113 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 TMEM14DPA8MWL7 114 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 B4DEV8 164 aa4.9□□□□□ -1.63
TMEM39A-209ENST00000486235 C12orf77C9JDV5 145 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms