RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 RNF2Q99496 336 aa13.71□□□□□ -0.21
PRPF40A-209ENST00000486100 OR4C46A6NHA9 309 aa13.7□□□□□ -0.22
PRPF40A-209ENST00000486100 A6NHS1 94 aa13.7□□□□□ -0.22
PRPF40A-209ENST00000486100 TOMM20LQ6UXN7 152 aa13.7□□□□□ -0.22
PRPF40A-209ENST00000486100 GALNT14Q96FL9 552 aa13.7□□□□□ -0.22
PRPF40A-209ENST00000486100 MCUBQ9NWR8 336 aa13.7□□□□□ -0.22
PRPF40A-209ENST00000486100 CACNG5Q9UF02 275 aa13.7□□□□□ -0.22
PRPF40A-209ENST00000486100 UBQLN2Q9UHD9 624 aa13.7□□□□□ -0.22
PRPF40A-209ENST00000486100 TMEM187Q14656 261 aa13.69□□□□□ -0.22
PRPF40A-209ENST00000486100 MLANAQ16655 118 aa13.69□□□□□ -0.22
PRPF40A-209ENST00000486100 ZNF600Q6ZNG1 722 aa13.69□□□□□ -0.22
PRPF40A-209ENST00000486100 IL22RA2Q969J5 263 aa13.69□□□□□ -0.22
PRPF40A-209ENST00000486100 TMEM230Q96A57 120 aa13.69□□□□□ -0.22
PRPF40A-209ENST00000486100 GINS3Q9BRX5 216 aa13.69□□□□□ -0.22
PRPF40A-209ENST00000486100 FNDC4Q9H6D8 234 aaPredicted RBP13.69□□□□□ -0.22
PRPF40A-209ENST00000486100 IGHV3-49A0A0A0MS15 119 aa13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 CCDC160A6NGH7 325 aa13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 CLN5O75503 358 aa13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 OPRK1P41145 380 aa13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 HTR2BP41595 481 aa13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 ODF3L2Q3SX64 289 aa13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 HEYLQ9NQ87 328 aaPredicted RBP13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 PUS1Q9Y606 427 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRPF40A-209ENST00000486100 CMC4P56277 68 aaPredicted RBP13.67□□□□□ -0.22
PRPF40A-209ENST00000486100 PYDC2Q56P42 97 aa13.67□□□□□ -0.22
PRPF40A-209ENST00000486100 FAM90A2PQ658T7 463 aa13.67□□□□□ -0.22
PRPF40A-209ENST00000486100 IL17DQ8TAD2 202 aa13.67□□□□□ -0.22
PRPF40A-209ENST00000486100 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
PRPF40A-209ENST00000486100 ZFAND3Q9H8U3 227 aa13.67□□□□□ -0.22
PRPF40A-209ENST00000486100 MRPL36Q9P0J6 103 aaKnown RBP13.67□□□□□ -0.22
PRPF40A-209ENST00000486100 IGHV3OR16-13A0A075B7E8 117 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 IGHV3-74A0A0B4J1X5 117 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 CEBPZOSA8MTT3 80 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 CD5P06127 495 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 SULT1A3P0DMM9 295 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 SULT1A4P0DMN0 295 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 AKR1C4P17516 323 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 BMI1P35226 326 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 FAUP35544 74 aaKnown RBP13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 APOC4P55056 127 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 KLF9Q13886 244 aaPredicted RBP13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 C2orf83Q53S99 150 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 VSIRQ9H7M9 311 aa13.66□□□□□ -0.22
PRPF40A-209ENST00000486100 A0A1B0GU03 582 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 RPS10-NUDT3A0A1W2PQS6 291 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 SCGB2A1O75556 95 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 APOHP02749 345 aaPredicted RBP13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 S100A5P33763 92 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 AP3S2P59780 193 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 SUPT4H1P63272 117 aaKnown RBP13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 TOMM5Q8N4H5 51 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 TRIM63Q969Q1 353 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 PRR13Q9NZ81 148 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 V9GYH0 126 aa13.65□□□□□ -0.22
PRPF40A-209ENST00000486100 STARD9Q9P2P6 4700 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 IGKV3-7A0A075B6H7 116 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 TRAV30A0A087WSZ9 112 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 A0A0B4J2A0 478 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 UBE2CO00762 179 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 ANXA3P12429 323 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 TFPI2P48307 235 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 PAFAH1B2P68402 229 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 NMSQ5H8A3 153 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 Q6ZWC4 215 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 TCF24Q7RTU0 167 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 LYZL2Q7Z4W2 148 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 LILRB2Q8N423 598 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 RNASEH2CQ8TDP1 164 aaKnown RBP13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 ST8SIA2Q92186 375 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 SHPKQ9UHJ6 478 aa13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 DYNC2H1Q8NCM8 4307 aaKnown RBP13.64□□□□□ -0.23
PRPF40A-209ENST00000486100 KIR2DL5BA0A0G2JN68 375 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 KIR2DL5BA0A0G2JPC4 375 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 SLC25A4P12235 298 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 NPPCP23582 126 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 CCR6P51684 374 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 SRPXP78539 464 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 ZNF79Q15937 498 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 APRG1Q8IVJ8 170 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 KIR2DL5AQ8N109 375 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 LGI3Q8N145 548 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 GBGT1Q8N5D6 347 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 SLC24A4Q8NFF2 622 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 KIR2DL5BQ8NHK3 375 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 TP53TG1Q9Y2A0 90 aa13.63□□□□□ -0.23
PRPF40A-209ENST00000486100 IGHV3-66A0A0C4DH42 116 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 A0A1W2PS18 150 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 DFFBO76075 338 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 NXPH3O95157 252 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 IGKV1-17P01599 117 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 SMCO1Q147U7 214 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 TIGITQ495A1 244 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 PRSS54Q6PEW0 395 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 NOXA1Q86UR1 476 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 WFDC3Q8IUB2 231 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 STPG3Q8N7X2 389 aa13.62□□□□□ -0.23
PRPF40A-209ENST00000486100 TMEM170AQ8WVE7 144 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms