RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ELLP55199 621 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-207ENST00000486080 C19orf54Q5BKX5 351 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 ACSM6Q6P461 480 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 SLC7A5P1Q8MH63 180 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 ZNF709Q8N972 641 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 TMEM160Q9NX00 188 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 TIMM9Q9Y5J7 89 aa11.31□□□□□ -0.6
COL9A1-207ENST00000486080 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 TEX46H3BTG2 121 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 AGPAT2O15120 278 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 MPDU1O75352 247 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 IGF1P05019 195 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 CD99P14209 185 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-207ENST00000486080 TMEM95Q3KNT9 176 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 ETFRF1Q6IPR1 90 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 S4R3C0 116 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 OR2J3O76001 311 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 NDUFB8O95169 186 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 OR10J1P30954 320 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 AKR1C8PQ5T2L2 129 aa11.3□□□□□ -0.6
COL9A1-207ENST00000486080 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-207ENST00000486080 IGKV1D-37A0A075B6S9 117 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 C17orf112F2Z3M2 114 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 RAB2AP61019 212 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 SERF2P84101 59 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 RBMS3Q6XE24 437 aaKnown RBP11.29□□□□□ -0.6
COL9A1-207ENST00000486080 Q6ZRG5 221 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 FAM213BQ8TBF2 198 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 TMEM68Q96MH6 324 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 RPRMQ9NS64 109 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 CUBNO60494 3623 aa11.29□□□□□ -0.6
COL9A1-207ENST00000486080 UMAD1C9J7I0 102 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 GATA2P23769 480 aaPredicted RBP11.28□□□□□ -0.6
COL9A1-207ENST00000486080 RAB31Q13636 194 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 PXDC1Q5TGL8 231 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 TMEM116Q8NCL8 245 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 MS4A10Q96PG2 267 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 ESM1Q9NQ30 184 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 FBXL7Q9UJT9 491 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 F8P00451 2351 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 MFSD2BA6NFX1 497 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 DNAJC9-AS1A6NH13 148 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 TRIM77I1YAP6 450 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 AP4M1O00189 453 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 YIF1AO95070 293 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 SRD5A1P18405 259 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 RAB5CP51148 216 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 ZNF90Q03938 601 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 STPG3Q8N7X2 389 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 THAP8Q8NA92 274 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 BPIFCQ8NFQ6 507 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 LRRC20Q8TCA0 184 aa11.28□□□□□ -0.6
COL9A1-207ENST00000486080 SAT2Q96F10 170 aaPredicted RBP11.28□□□□□ -0.6
COL9A1-207ENST00000486080 NF1P21359 2839 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 ZFP92A6NM28 416 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 CYB5BO43169 146 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 EIF3GO75821 320 aaKnown RBP eCLIP11.27□□□□□ -0.61
COL9A1-207ENST00000486080 IGHV3-23P01764 117 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 LINC00869P0C866 280 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 FOSL1P15407 271 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 RHOGP84095 191 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 ZNF616Q08AN1 781 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 KLK9Q2XQG4 91 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 TMEM86BQ8N661 226 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 OR4X1Q8NH49 305 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 ZNF702PQ9H963 129 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 KLK9Q9UKQ9 250 aa11.27□□□□□ -0.61
COL9A1-207ENST00000486080 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.61
COL9A1-207ENST00000486080 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 LINC00862A6NCI5 91 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 TSPAN15O95858 294 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
COL9A1-207ENST00000486080 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
COL9A1-207ENST00000486080 B2MP61769 119 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 PRR20EP86478 221 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 PRR20CP86479 221 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 PRR20DP86480 221 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 PRR20BP86481 221 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 PRR20AP86496 221 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 CYP2G1PQ6ZSU1 146 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 THYN1Q9P016 225 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 CDC42EP3Q9UKI2 254 aa11.26□□□□□ -0.61
COL9A1-207ENST00000486080 A0A1B0GV50 99 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 HIST1H1BP16401 226 aaKnown RBP11.25□□□□□ -0.61
COL9A1-207ENST00000486080 BLOC1S1P78537 153 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 ZNF726P1Q15940 193 aa11.25□□□□□ -0.61
COL9A1-207ENST00000486080 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms