RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 SRRQ9GZT4 340 aa14.62□□□□□ -0.07
SNX5-213ENST00000486039 MRPL36Q9P0J6 103 aaKnown RBP14.62□□□□□ -0.07
SNX5-213ENST00000486039 SMPXQ9UHP9 88 aa14.62□□□□□ -0.07
SNX5-213ENST00000486039 CORTO00230 105 aa14.61□□□□□ -0.07
SNX5-213ENST00000486039 TSPAN4O14817 238 aa14.61□□□□□ -0.07
SNX5-213ENST00000486039 NPBWR1P48145 328 aa14.61□□□□□ -0.07
SNX5-213ENST00000486039 ANKRD55Q3KP44 614 aa14.61□□□□□ -0.07
SNX5-213ENST00000486039 LYZL2Q7Z4W2 148 aa14.61□□□□□ -0.07
SNX5-213ENST00000486039 A0A0B4J2A0 478 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 IGHV7-4-1A0A0J9YVY3 117 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 NXPH3O95157 252 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 TMEM50AO95807 157 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 SULT1A3P0DMM9 295 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 SULT1A4P0DMN0 295 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 NMSQ5H8A3 153 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 SPANXN2Q5MJ10 180 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 TMED4Q7Z7H5 227 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 DEDD2Q8WXF8 326 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 SPAG8Q99932 426 aaPredicted RBP14.6□□□□□ -0.07
SNX5-213ENST00000486039 HEYLQ9NQ87 328 aaPredicted RBP14.6□□□□□ -0.07
SNX5-213ENST00000486039 SHPKQ9UHJ6 478 aa14.6□□□□□ -0.07
SNX5-213ENST00000486039 IGHV3-49A0A0A0MS15 119 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 CEBPZOSA8MTT3 80 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 CHEK1O14757 476 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 ANXA3P12429 323 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 LYL1P12980 280 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 OPRK1P41145 380 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 HTR2BP41595 481 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 C2orf83Q53S99 150 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 LAMTOR1Q6IAA8 161 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 TOMM20LQ6UXN7 152 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 LGI3Q8N145 548 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 TMEM116Q8NCL8 245 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 CITED4Q96RK1 184 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 RNF2Q99496 336 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 RHPN1-AS1Q9BWJ2 59 aa14.59□□□□□ -0.07
SNX5-213ENST00000486039 TRAV14DV4A0A0A6YYC5 116 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 CLN5O75503 358 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 CCR6P51684 374 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 BAK1Q16611 211 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 TMEM128Q5BJH2 165 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 OR4X1Q8NH49 305 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 TMEM170AQ8WVE7 144 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 SLC25A21Q9BQT8 299 aaPredicted RBP14.58□□□□□ -0.08
SNX5-213ENST00000486039 HIPK2Q9H2X6 1198 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 ZFAND3Q9H8U3 227 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 RETNQ9HD89 108 aa14.58□□□□□ -0.08
SNX5-213ENST00000486039 PUS1Q9Y606 427 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNX5-213ENST00000486039 A0A1B0GU03 582 aa14.57□□□□□ -0.08
SNX5-213ENST00000486039 SRPXP78539 464 aa14.57□□□□□ -0.08
SNX5-213ENST00000486039 SMCO1Q147U7 214 aa14.57□□□□□ -0.08
SNX5-213ENST00000486039 ZNF600Q6ZNG1 722 aa14.57□□□□□ -0.08
SNX5-213ENST00000486039 SLC24A4Q8NFF2 622 aa14.57□□□□□ -0.08
SNX5-213ENST00000486039 SDHCQ99643 169 aaPredicted RBP14.57□□□□□ -0.08
SNX5-213ENST00000486039 EDA2RQ9HAV5 297 aa14.57□□□□□ -0.08
SNX5-213ENST00000486039 UBQLN2Q9UHD9 624 aa14.57□□□□□ -0.08
SNX5-213ENST00000486039 STARD9Q9P2P6 4700 aa14.57□□□□□ -0.08
SNX5-213ENST00000486039 IGHV3OR16-13A0A075B7E8 117 aa14.56□□□□□ -0.08
SNX5-213ENST00000486039 IGHV3-74A0A0B4J1X5 117 aa14.56□□□□□ -0.08
SNX5-213ENST00000486039 TNFRSF9Q07011 255 aa14.56□□□□□ -0.08
SNX5-213ENST00000486039 HSPB7Q9UBY9 170 aa14.56□□□□□ -0.08
SNX5-213ENST00000486039 CACFD1Q9UGQ2 172 aa14.56□□□□□ -0.08
SNX5-213ENST00000486039 APOHP02749 345 aaPredicted RBP14.55□□□□□ -0.08
SNX5-213ENST00000486039 ODF3L2Q3SX64 289 aa14.55□□□□□ -0.08
SNX5-213ENST00000486039 GINS3Q9BRX5 216 aa14.55□□□□□ -0.08
SNX5-213ENST00000486039 RPS10-NUDT3A0A1W2PQS6 291 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 SFT2D2O95562 160 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 IGKV1-17P01599 117 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 VAMP1P23763 118 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 PPP1R1AQ13522 171 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 FAM90A2PQ658T7 463 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 PRSS54Q6PEW0 395 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 LILRB2Q8N423 598 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 LRTM2Q8N967 370 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 RNASEH2CQ8TDP1 164 aaKnown RBP14.54□□□□□ -0.08
SNX5-213ENST00000486039 ST8SIA2Q92186 375 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 FAM110AQ9BQ89 295 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 RBKSQ9H477 322 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 NDUFA13Q9P0J0 144 aa14.54□□□□□ -0.08
SNX5-213ENST00000486039 LOC102724200A0A096LPH7 203 aaPredicted RBP14.53□□□□□ -0.08
SNX5-213ENST00000486039 DUXBA0A1W2PPF3 345 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 OR4C46A6NHA9 309 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 PITX3O75364 302 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 NPY1RP25929 384 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 RBMS2Q15434 407 aaKnown RBP14.53□□□□□ -0.08
SNX5-213ENST00000486039 TIGITQ495A1 244 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 TRIQKQ629K1 86 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 DTD1Q8TEA8 209 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 GGTLC1Q9BX51 225 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 VSIRQ9H7M9 311 aa14.53□□□□□ -0.08
SNX5-213ENST00000486039 ZFAND6Q6FIF0 208 aa14.52□□□□□ -0.09
SNX5-213ENST00000486039 CENPSQ8N2Z9 138 aa14.52□□□□□ -0.09
SNX5-213ENST00000486039 OR1S1Q8NH92 325 aa14.52□□□□□ -0.09
SNX5-213ENST00000486039 U3KQ87 197 aa14.52□□□□□ -0.09
SNX5-213ENST00000486039 TENM2Q9NT68 2774 aa14.52□□□□□ -0.09
SNX5-213ENST00000486039 IGKV3-7A0A075B6H7 116 aa14.51□□□□□ -0.09
SNX5-213ENST00000486039 TRAV30A0A087WSZ9 112 aa14.51□□□□□ -0.09
SNX5-213ENST00000486039 PIGBOS1A0A0B4J2F0 54 aa14.51□□□□□ -0.09
SNX5-213ENST00000486039 IGHV3-66A0A0C4DH42 116 aa14.51□□□□□ -0.09
SNX5-213ENST00000486039 NAP1L6A6NFF2 107 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms