RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PLEKHA3Q9HB20 300 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 S4R3C0 116 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 V9GYH0 126 aa5.25□□□□□ -1.57
VPS50-218ENST00000485994 CSMD3Q7Z407 3707 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 A0A0B4J2A0 478 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 A0A0G2JRQ6 117 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 OR11H12B2RN74 326 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 MT-CO2P00403 227 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 IFNA17P01571 189 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 OR5AC1P0C628 307 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 RNASE2P10153 161 aaKnown RBP5.24□□□□□ -1.57
VPS50-218ENST00000485994 EDN2P20800 178 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 FAUP35544 74 aaKnown RBP5.24□□□□□ -1.57
VPS50-218ENST00000485994 HTR2BP41595 481 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 AKR1C2P52895 323 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 PPP5CP53041 499 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 CD81P60033 236 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 TMEM187Q14656 261 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 ZNF79Q15937 498 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 IZUMO4Q1ZYL8 232 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 TRIM16LQ309B1 348 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 CNPY1Q3B7I2 92 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 C2orf83Q53S99 150 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 RBPMS2Q6ZRY4 209 aaKnown RBP5.24□□□□□ -1.57
VPS50-218ENST00000485994 DUSP18Q8NEJ0 188 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 LHFPL5Q8TAF8 219 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 MUC7Q8TAX7 377 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 GPR146Q96CH1 333 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 WDR89Q96FK6 387 aaPredicted RBP5.24□□□□□ -1.57
VPS50-218ENST00000485994 SDHCQ99643 169 aaPredicted RBP5.24□□□□□ -1.57
VPS50-218ENST00000485994 SLC25A21Q9BQT8 299 aaPredicted RBP5.24□□□□□ -1.57
VPS50-218ENST00000485994 PDCD10Q9BUL8 212 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 HIPK2Q9H2X6 1198 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 EDA2RQ9HAV5 297 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 SHPKQ9UHJ6 478 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 SMPXQ9UHP9 88 aa5.24□□□□□ -1.57
VPS50-218ENST00000485994 TRAV30A0A087WSZ9 112 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 TRAV14DV4A0A0A6YYC5 116 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 IGHV7-4-1A0A0J9YVY3 117 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 DUXBA0A1W2PPF3 345 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 RBMY1BA6NDE4 496 aaKnown RBP5.23□□□□□ -1.57
VPS50-218ENST00000485994 RBMY1EA6NEQ0 496 aaKnown RBP5.23□□□□□ -1.57
VPS50-218ENST00000485994 GNG7O60262 68 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 CLN5O75503 358 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 RBMY1DP0C7P1 496 aaKnown RBP5.23□□□□□ -1.57
VPS50-218ENST00000485994 S100A5P33763 92 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 SUPT4H1P63272 117 aaKnown RBP5.23□□□□□ -1.57
VPS50-218ENST00000485994 KLF9Q13886 244 aaPredicted RBP5.23□□□□□ -1.57
VPS50-218ENST00000485994 GUCA2BQ16661 112 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 Q56UQ5 140 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 TMEM128Q5BJH2 165 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 NMSQ5H8A3 153 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 FAM90A2PQ658T7 463 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 FAAP20Q6NZ36 180 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 NOXA1Q86UR1 476 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 TOMM5Q8N4H5 51 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 DEFB125Q8N687 156 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 SLC35G3Q8N808 338 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 LRTM2Q8N967 370 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 TMEM116Q8NCL8 245 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 OR4X1Q8NH49 305 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 RNASEH2CQ8TDP1 164 aaKnown RBP5.23□□□□□ -1.57
VPS50-218ENST00000485994 CACNG8Q8WXS5 425 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 TRIM63Q969Q1 353 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 TMEM230Q96A57 120 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 MISP3Q96FF7 219 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 VSIRQ9H7M9 311 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 ENY2Q9NPA8 101 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 BATF3Q9NR55 127 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 U3KQ87 197 aa5.23□□□□□ -1.57
VPS50-218ENST00000485994 IGHV3-21A0A0B4J1V1 117 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 TRAV2A0A0B4J234 112 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 IGHV3-35A0A0C4DH35 117 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 KIR2DL5BA0A0G2JN68 375 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 KIR2DL5BA0A0G2JPC4 375 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 A0A1B0GU03 582 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 UBE2CO00762 179 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 CHEK1O14757 476 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 SLC25A4P12235 298 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 SLC25A6P12236 298 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 ANXA3P12429 323 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 BMI1P35226 326 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 CCR6P51684 374 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 SRPXP78539 464 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 CASC10Q5T4H9 136 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 TMEM268Q5VZI3 342 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 ETFRF1Q6IPR1 90 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 BTNL8Q6UX41 500 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 TOMM20LQ6UXN7 152 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 ZNF600Q6ZNG1 722 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 WFDC3Q8IUB2 231 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 KIR2DL5AQ8N109 375 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 LGI3Q8N145 548 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 OR52B4Q8NGK2 314 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 KIR2DL5BQ8NHK3 375 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 IL17DQ8TAD2 202 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 GINS3Q9BRX5 216 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 RHPN1-AS1Q9BWJ2 59 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 SRRQ9GZT4 340 aa5.22□□□□□ -1.57
VPS50-218ENST00000485994 FNDC4Q9H6D8 234 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms