RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 OR4D5Q8NGN0 318 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 TMEM170AQ8WVE7 144 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 GAR1Q9NY12 217 aaKnown RBP9.04□□□□□ -0.96
HPS4-214ENST00000485842 PEMTQ9UBM1 199 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 U3KQ87 197 aa9.04□□□□□ -0.96
HPS4-214ENST00000485842 H3BP45 60 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 NUPL2O15504 423 aaKnown RBP9.03□□□□□ -0.96
HPS4-214ENST00000485842 WIPF1O43516 503 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 SSSCA1O60232 199 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 IFNA4P05014 189 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 FCGR2BP31994 310 aaPredicted RBP9.03□□□□□ -0.96
HPS4-214ENST00000485842 ADMP35318 185 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 MLANAQ16655 118 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 REC114Q7Z4M0 266 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 GPHB5Q86YW7 130 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 RNASEH2CQ8TDP1 164 aaKnown RBP9.03□□□□□ -0.96
HPS4-214ENST00000485842 CIB3Q96Q77 187 aaPredicted RBP9.03□□□□□ -0.96
HPS4-214ENST00000485842 TXN2Q99757 166 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 MARVELD1Q9BSK0 173 aa9.03□□□□□ -0.96
HPS4-214ENST00000485842 MRPL36Q9P0J6 103 aaKnown RBP9.03□□□□□ -0.96
HPS4-214ENST00000485842 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 C15orf62A8K5M9 175 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 LGALS9O00182 355 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 LY86O95711 162 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 PTTG1O95997 202 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 CSN3P07498 182 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 CTSGP08311 255 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 EDN2P20800 178 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 ID3Q02535 119 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 UNQ9165/PRO28630Q6UXU0 137 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 GSG1LQ6UXU4 331 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 IL34Q6ZMJ4 242 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 SLC16A13Q7RTY0 426 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 DYNLRB2Q8TF09 96 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 CACNG8Q8WXS5 425 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 C20orf24Q9BUV8 137 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 PALMDQ9NP74 551 aa9.02□□□□□ -0.97
HPS4-214ENST00000485842 AURKAIP1Q9NWT8 199 aaPredicted RBP9.02□□□□□ -0.97
HPS4-214ENST00000485842 TMEM213A2RRL7 107 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 C2orf70A6NJV1 201 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 SNRPGP15A8MWD9 76 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 A8MWP6 167 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 NDUFA4O00483 81 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 GOSR2O14653 212 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 CLN5O75503 358 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 YIF1AO95070 293 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 SLC25A4P12235 298 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 RND2P52198 227 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 ATP5IP56385 69 aaPredicted RBP9.01□□□□□ -0.97
HPS4-214ENST00000485842 RAB11AP62491 216 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 RPP30P78346 268 aaKnown RBP9.01□□□□□ -0.97
HPS4-214ENST00000485842 RELQ04864 619 aaPredicted RBP9.01□□□□□ -0.97
HPS4-214ENST00000485842 SPANXN5Q5MJ07 72 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 ETFRF1Q6IPR1 90 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 PRSS54Q6PEW0 395 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 OR4X1Q8NH49 305 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 TMEM190Q8WZ59 177 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 ACY3Q96HD9 319 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 C2orf50Q96LR7 162 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 PRR25Q96S07 402 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 ZNF436Q9C0F3 470 aaPredicted RBP9.01□□□□□ -0.97
HPS4-214ENST00000485842 PSENENQ9NZ42 101 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 RCL1Q9Y2P8 373 aaKnown RBP9.01□□□□□ -0.97
HPS4-214ENST00000485842 UFC1Q9Y3C8 167 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 LSM5Q9Y4Y9 91 aaKnown RBP9.01□□□□□ -0.97
HPS4-214ENST00000485842 SELENOKQ9Y6D0 94 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
HPS4-214ENST00000485842 ZNF207O43670 478 aaKnown RBP9□□□□□ -0.97
HPS4-214ENST00000485842 SSNA1O43805 119 aa9□□□□□ -0.97
HPS4-214ENST00000485842 SCGB2A1O75556 95 aa9□□□□□ -0.97
HPS4-214ENST00000485842 SIX6O95475 246 aa9□□□□□ -0.97
HPS4-214ENST00000485842 TMEM50AO95807 157 aa9□□□□□ -0.97
HPS4-214ENST00000485842 IGLV1-51P01701 117 aa9□□□□□ -0.97
HPS4-214ENST00000485842 MBPP02686 304 aaPredicted RBP9□□□□□ -0.97
HPS4-214ENST00000485842 FOLR2P14207 255 aa9□□□□□ -0.97
HPS4-214ENST00000485842 S100A10P60903 97 aa9□□□□□ -0.97
HPS4-214ENST00000485842 CD69Q07108 199 aa9□□□□□ -0.97
HPS4-214ENST00000485842 DCTN2Q13561 401 aaKnown RBP9□□□□□ -0.97
HPS4-214ENST00000485842 TIGITQ495A1 244 aa9□□□□□ -0.97
HPS4-214ENST00000485842 TM4SF20Q53R12 229 aa9□□□□□ -0.97
HPS4-214ENST00000485842 SLC35E1Q96K37 410 aa9□□□□□ -0.97
HPS4-214ENST00000485842 ZMAT5Q9UDW3 170 aaKnown RBP9□□□□□ -0.97
HPS4-214ENST00000485842 ZNF256Q9Y2P7 627 aaPredicted RBP9□□□□□ -0.97
HPS4-214ENST00000485842 STRAPQ9Y3F4 350 aaKnown RBP9□□□□□ -0.97
HPS4-214ENST00000485842 WI2-2373I1.2A0A1W2PRP0 233 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 L7N2F9 121 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 OR10J1P30954 320 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 VAMP2P63027 116 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 ADAMTSL5Q6ZMM2 481 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 ZNF600Q6ZNG1 722 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 MRAPQ8TCY5 172 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 NPIPB3Q92617 1050 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 ZNF414Q96IQ9 312 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 DAZ1Q9NQZ3 744 aaKnown RBP8.99□□□□□ -0.97
HPS4-214ENST00000485842 SIGLEC8Q9NYZ4 499 aa8.99□□□□□ -0.97
HPS4-214ENST00000485842 K7EIL1 84 aa8.98□□□□□ -0.97
HPS4-214ENST00000485842 K7EPK0 472 aa8.98□□□□□ -0.97
HPS4-214ENST00000485842 CBLN1P23435 193 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms