RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CORTO00230 105 aa11.33□□□□□ -0.59
LRIF1-202ENST00000485275 TPT1P13693 172 aaKnown RBP11.33□□□□□ -0.59
LRIF1-202ENST00000485275 FAM74A1Q5RGS3 127 aa11.33□□□□□ -0.59
LRIF1-202ENST00000485275 SCARB1Q8WTV0 552 aa11.33□□□□□ -0.59
LRIF1-202ENST00000485275 TMED6Q8WW62 240 aa11.33□□□□□ -0.59
LRIF1-202ENST00000485275 ACY3Q96HD9 319 aa11.33□□□□□ -0.59
LRIF1-202ENST00000485275 KLK15Q9H2R5 256 aa11.33□□□□□ -0.59
LRIF1-202ENST00000485275 IGKV1D-37A0A075B6S9 117 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 BORCS7-ASMTA0A0B4J1R7 106 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 SCAF4O95104 1147 aaKnown RBP11.33□□□□□ -0.6
LRIF1-202ENST00000485275 IGLV1-40P01703 118 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 FGF7P21781 194 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 GPX4P36969 197 aaPredicted RBP11.33□□□□□ -0.6
LRIF1-202ENST00000485275 RND2P52198 227 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 RHOGP84095 191 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 AKR1C1Q04828 323 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 ZNF680Q8NEM1 530 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 CACNG8Q8WXS5 425 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 NPCDR1Q9BY65 106 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 PARD6GQ9BYG4 376 aaPredicted RBP11.33□□□□□ -0.6
LRIF1-202ENST00000485275 SLA2Q9H6Q3 261 aa11.33□□□□□ -0.6
LRIF1-202ENST00000485275 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
LRIF1-202ENST00000485275 FNDC10F2Z333 226 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 IGHV3-23P01764 117 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 SPP1P10451 314 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 BTNL8Q6UX41 500 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 TMEM182Q6ZP80 229 aaPredicted RBP11.32□□□□□ -0.6
LRIF1-202ENST00000485275 OR1L6Q8NGR2 347 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 NPIPB3Q92617 1050 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 SLC25A32Q9H2D1 315 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 ZNF355PQ9NSJ1 428 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
LRIF1-202ENST00000485275 TSPAN9O75954 239 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 IFNA5P01569 189 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 C15orf32Q32M92 178 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 TMEM116Q8NCL8 245 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 SLC35E1Q96K37 410 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 NPVFQ9HCQ7 196 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 IGHG4P01861 327 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 PSMB8P28062 276 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 ZNF414Q96IQ9 312 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 CCDC140Q96MF4 163 aa11.31□□□□□ -0.6
LRIF1-202ENST00000485275 RGS13O14921 159 aa11.3□□□□□ -0.6
LRIF1-202ENST00000485275 AGPAT2O15120 278 aa11.3□□□□□ -0.6
LRIF1-202ENST00000485275 ZNF90Q03938 601 aa11.3□□□□□ -0.6
LRIF1-202ENST00000485275 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
LRIF1-202ENST00000485275 THAP8Q8NA92 274 aa11.3□□□□□ -0.6
LRIF1-202ENST00000485275 PCNPQ8WW12 178 aaKnown RBP11.3□□□□□ -0.6
LRIF1-202ENST00000485275 RPS10-NUDT3A0A1W2PQS6 291 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 TCF21O43680 179 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 BRI3O95415 125 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 TRGV3P03979 118 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 IGLC1P0CG04 106 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 HIST1H1BP16401 226 aaKnown RBP11.29□□□□□ -0.6
LRIF1-202ENST00000485275 GATA2P23769 480 aaPredicted RBP11.29□□□□□ -0.6
LRIF1-202ENST00000485275 TPPP2P59282 170 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 RPL15P61313 204 aaKnown RBP11.29□□□□□ -0.6
LRIF1-202ENST00000485275 HIST2H2BDQ6DRA6 164 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 ACSM6Q6P461 480 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 CENPVQ7Z7K6 275 aaPredicted RBP11.29□□□□□ -0.6
LRIF1-202ENST00000485275 NECAP1Q8NC96 275 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 ZNF502Q8TBZ5 544 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 PHYHIPLQ96FC7 376 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 VSIRQ9H7M9 311 aa11.29□□□□□ -0.6
LRIF1-202ENST00000485275 PF4V1P10720 104 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 OR10J1P30954 320 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
LRIF1-202ENST00000485275 MIC13Q5XKP0 118 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 ETFRF1Q6IPR1 90 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 SCGB1C1Q8TD33 95 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 WIPF2Q8TF74 440 aaPredicted RBP11.28□□□□□ -0.6
LRIF1-202ENST00000485275 C2CD3Q4AC94 2353 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 PSMB11A5LHX3 300 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 H3BUA1 57 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 CLN5O75503 358 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 IGKV1-17P01599 117 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 CAMLGP49069 296 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 FHITP49789 147 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 RAB9AP51151 201 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 EIF5AP63241 154 aaKnown RBP11.28□□□□□ -0.6
LRIF1-202ENST00000485275 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 OR2G3Q8NGZ4 309 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 LINC01006Q8NI28 216 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
LRIF1-202ENST00000485275 C21orf62Q9NYP8 219 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 THYN1Q9P016 225 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 SLC45A2Q9UMX9 530 aa11.28□□□□□ -0.6
LRIF1-202ENST00000485275 FAM223BA6NKX1 122 aa11.27□□□□□ -0.61
LRIF1-202ENST00000485275 MPDU1O75352 247 aa11.27□□□□□ -0.61
LRIF1-202ENST00000485275 YIF1AO95070 293 aa11.27□□□□□ -0.61
LRIF1-202ENST00000485275 LINC00869P0C866 280 aa11.27□□□□□ -0.61
LRIF1-202ENST00000485275 ELLP55199 621 aaPredicted RBP11.27□□□□□ -0.61
LRIF1-202ENST00000485275 PRR20EP86478 221 aa11.27□□□□□ -0.61
LRIF1-202ENST00000485275 PRR20CP86479 221 aa11.27□□□□□ -0.61
LRIF1-202ENST00000485275 PRR20DP86480 221 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms