RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 NPBWR1P48145 328 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 CCR6P51684 374 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 BAK1Q16611 211 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 AARDQ4LEZ3 155 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 OR52E5Q8NH55 327 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 FAM110AQ9BQ89 295 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 SPATA25Q9BR10 227 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 TRAV25A0A0B4J276 109 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 A0A0B4J2A0 478 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 IGHV7-4-1A0A0J9YVY3 117 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 C15orf62A8K5M9 175 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 K7EMT4 169 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 CORTO00230 105 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 INPP1P49441 399 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 ANKRD55Q3KP44 614 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 NMSQ5H8A3 153 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 TRIQKQ629K1 86 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 PVRIGQ6DKI7 326 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 TOMM20LQ6UXN7 152 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 LGI3Q8N145 548 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 TMEM116Q8NCL8 245 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 SLC24A4Q8NFF2 622 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 DNAH7Q8WXX0 4024 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 RNF2Q99496 336 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 RHPN1-AS1Q9BWJ2 59 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 SHPKQ9UHJ6 478 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 SMPXQ9UHP9 88 aa9.18□□□□□ -0.94
MSH5-216ENST00000484309 PUS1Q9Y606 427 aaKnown RBP eCLIP9.18□□□□□ -0.94
MSH5-216ENST00000484309 IGHV3-66A0A0C4DH42 116 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 A0A1B0GU03 582 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 CHEK1O14757 476 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 TMEM50AO95807 157 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 HTR2BP41595 481 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 TFPI2P48307 235 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 PPP1R1AQ13522 171 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 SMCO1Q147U7 214 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 TIGITQ495A1 244 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 TMEM128Q5BJH2 165 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 LAMTOR1Q6IAA8 161 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 LINC00322Q6ZN03 302 aaPredicted RBP9.17□□□□□ -0.94
MSH5-216ENST00000484309 ZNF600Q6ZNG1 722 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 OR1S1Q8NH92 325 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 TMEM170AQ8WVE7 144 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 OR10C1Q96KK4 312 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 CITED4Q96RK1 184 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 SDHCQ99643 169 aaPredicted RBP9.17□□□□□ -0.94
MSH5-216ENST00000484309 RBKSQ9H477 322 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
MSH5-216ENST00000484309 TRAV14DV4A0A0A6YYC5 116 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 TSPAN4O14817 238 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 CLN5O75503 358 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
MSH5-216ENST00000484309 NPY1RP25929 384 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 SRPXP78539 464 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 TNFRSF9Q07011 255 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 C2orf83Q53S99 150 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 CENPSQ8N2Z9 138 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 ST8SIA2Q92186 375 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 SPAG8Q99932 426 aaPredicted RBP9.16□□□□□ -0.94
MSH5-216ENST00000484309 SLC25A21Q9BQT8 299 aaPredicted RBP9.16□□□□□ -0.94
MSH5-216ENST00000484309 GINS3Q9BRX5 216 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 HIPK2Q9H2X6 1198 aa9.16□□□□□ -0.94
MSH5-216ENST00000484309 SFT2D2O95562 160 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 IFNA10P01566 189 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 RND2P52198 227 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 RBMS2Q15434 407 aaKnown RBP9.15□□□□□ -0.94
MSH5-216ENST00000484309 ODF3L2Q3SX64 289 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 GBGT1Q8N5D6 347 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 OR4X1Q8NH49 305 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 DTD1Q8TEA8 209 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 FLVCR2Q9UPI3 526 aa9.15□□□□□ -0.94
MSH5-216ENST00000484309 RPS10-NUDT3A0A1W2PQS6 291 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 OR4C46A6NHA9 309 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 HOXB5P09067 269 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 IAPPP10997 89 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 ZNF124Q15973 351 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 PRSS54Q6PEW0 395 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 TCF24Q7RTU0 167 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 LILRB2Q8N423 598 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 MUC7Q8TAX7 377 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 DEDD2Q8WXF8 326 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 ACY3Q96HD9 319 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 GGTLC1Q9BX51 225 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 AGRNO00468 2067 aa9.14□□□□□ -0.95
MSH5-216ENST00000484309 LOC102724200A0A096LPH7 203 aaPredicted RBP9.13□□□□□ -0.95
MSH5-216ENST00000484309 DUXBA0A1W2PPF3 345 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 NAP1L6A6NFF2 107 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 DFFBO76075 338 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 NDUFB6O95139 128 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 IGKV1-17P01599 117 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 IGLC1P0CG04 106 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 IL7P13232 177 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 BTCP35070 178 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 ZFAND6Q6FIF0 208 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 WFDC3Q8IUB2 231 aa9.13□□□□□ -0.95
MSH5-216ENST00000484309 APRG1Q8IVJ8 170 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms