RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SPOPLQ6IQ16 392 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 ANKRD29Q8N6D5 301 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 SIGLECL1Q8N7X8 197 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 C15orf53Q8NAA6 179 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 OR2T4Q8NH00 348 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 AQP3Q92482 292 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 KLK6Q92876 244 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 NIPSNAP1Q9BPW8 284 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 CMSS1Q9BQ75 279 aaKnown RBP0.42□□□□□ -2.34
SCAF11-207ENST00000484275 MRPL57Q9BQC6 102 aaKnown RBP0.42□□□□□ -2.34
SCAF11-207ENST00000484275 GINS4Q9BRT9 223 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 C20orf27Q9GZN8 174 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 SLC39A9Q9NUM3 307 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 CMTM6Q9NX76 183 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 TP73-AS1Q9UF72 201 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 ERGIC3Q9Y282 383 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 DOCK3Q8IZD9 2030 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 CASP8AP2Q9UKL3 1982 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 ADGRB2O60241 1585 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 PIK3C2AO00443 1686 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 IGKV1D-42A0A075B6H8 117 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 A0A087WX48 190 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 CLDN24A6NM45 220 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 BUB1B-PAK6H3BSN5 160 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 FAAHO00519 579 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 PIRO00625 290 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 FADS1O60427 444 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 CRYZL1O95825 349 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 CTSDP07339 412 aaPredicted RBP0.41□□□□□ -2.34
SCAF11-207ENST00000484275 ASAH2BP0C7U1 165 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 BAALC-AS2P0C853 105 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 MIFP14174 115 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 FKBP2P26885 142 aaKnown RBP0.41□□□□□ -2.34
SCAF11-207ENST00000484275 BRS3P32247 399 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 CDC42P60953 191 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 KISS1Q15726 138 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 KCNJ8Q15842 424 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 RGS21Q2M5E4 152 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 DPPA3Q6W0C5 159 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 TRAPPC6BQ86SZ2 158 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 PHF13Q86YI8 300 aaPredicted RBP0.41□□□□□ -2.34
SCAF11-207ENST00000484275 CLVS1Q8IUQ0 354 aaPredicted RBP0.41□□□□□ -2.34
SCAF11-207ENST00000484275 OR6V1Q8N148 313 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 HIST3H2BBQ8N257 126 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 CLDN22Q8N7P3 220 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 OR4E2Q8NGC2 313 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 TERB2Q8NHR7 220 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 H1FXQ92522 213 aaKnown RBP0.41□□□□□ -2.34
SCAF11-207ENST00000484275 BORCS7Q96B45 105 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 ODF3Q96PU9 254 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 SLC50A1Q9BRV3 221 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 TMEM147Q9BVK8 224 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 C11orf68Q9H3H3 251 aaKnown RBP0.41□□□□□ -2.34
SCAF11-207ENST00000484275 NHP2Q9NX24 153 aaKnown RBP0.41□□□□□ -2.34
SCAF11-207ENST00000484275 MRPL27Q9P0M9 148 aaKnown RBP0.41□□□□□ -2.34
SCAF11-207ENST00000484275 VPS29Q9UBQ0 182 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 RIMBP3CA6NJZ7 1639 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 RIMBP3BA6NNM3 1639 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 ADCY9O60503 1353 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 ROBO3Q96MS0 1386 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 RIMBP3Q9UFD9 1639 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 KIAA1549Q9HCM3 1950 aa0.41□□□□□ -2.34
SCAF11-207ENST00000484275 ADGBQ8N7X0 1667 aa0.4□□□□□ -2.34
SCAF11-207ENST00000484275 EML5Q05BV3 1969 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 TGIF2-C20orf24A0A0A6YYL0 155 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 TRAV26-2A0A0B4J265 109 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 OR4C46A6NHA9 309 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 KPNA3O00505 521 aaPredicted RBP0.4□□□□□ -2.35
SCAF11-207ENST00000484275 OR2T1O43869 369 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 OR1I1O60431 355 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 HYPMO75409 117 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 OR2J2O76002 312 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 RPP14O95059 124 aaKnown RBP0.4□□□□□ -2.35
SCAF11-207ENST00000484275 TTRP02766 147 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 SMIM10L2AP0DMW4 78 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 SMIM10L2BP0DMW5 78 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 SPI1P17947 270 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 S100A4P26447 101 aaKnown RBP0.4□□□□□ -2.35
SCAF11-207ENST00000484275 YPEL3P61236 119 aaPredicted RBP0.4□□□□□ -2.35
SCAF11-207ENST00000484275 RHOGP84095 191 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 PDE6HQ13956 83 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 EDDM3AQ14507 147 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 RHEBQ15382 184 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 Q6ZQT0 140 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 TRAPPC5Q8IUR0 188 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 KRT222Q8N1A0 295 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 OR8J2Q8NGG1 315 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 OR5A1Q8NGJ0 315 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 DNAJC9Q8WXX5 260 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 LINC00526Q96FQ7 95 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 CCDC42Q96M95 316 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 PPP1R2P1Q96PQ5 205 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 PARD6GQ9BYG4 376 aaPredicted RBP0.4□□□□□ -2.35
SCAF11-207ENST00000484275 ULBP3Q9BZM4 244 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 TAS2R4Q9NYW5 299 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 KLK9Q9UKQ9 250 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 PKIGQ9Y2B9 76 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 KMT2DO14686 5537 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 TECTAO75443 2155 aa0.4□□□□□ -2.35
SCAF11-207ENST00000484275 MYH2Q9UKX2 1941 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms