RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, human

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-215	ENST00000484203	DISC1	C4P0D8	188 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203		F5H697	171 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	UBE2C	O00762	179 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	TSPAN4	O14817	238 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	CTDSPL	O15194	276 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	RAB3D	O95716	219 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	IGHV3-23	P01764	117 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	HLA-A	P01891	365 aa	Known RBP	4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	CD3D	P04234	171 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	CTSD	P07339	412 aa	Predicted RBP	4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	AKR1C2	P52895	323 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	APOC4	P55056	127 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	PAFAH1B2	P68402	229 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	DHODH	Q02127	395 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	TRIM16L	Q309B1	348 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203		Q56UQ5	140 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	CASC10	Q5T4H9	136 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	STEAP1B	Q6NZ63	245 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203		Q6ZNX1	250 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	NOXA1	Q86UR1	476 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	LHFPL1	Q86WI0	220 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	TMEM61	Q8N0U2	210 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	OR2C3	Q8N628	320 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	SLC35G3	Q8N808	338 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	DUSP18	Q8NEJ0	188 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	OR10W1	Q8NGF6	305 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	RNASE11	Q8TAA1	199 aa	Known RBP	4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	SCARB1	Q8WTV0	552 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	DEDD2	Q8WXF8	326 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	MRGPRF	Q96AM1	343 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	PRRT1	Q99946	306 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	GINS3	Q9BRX5	216 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	SRD5A3	Q9H8P0	318 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	CCDC59	Q9P031	241 aa	Known RBP	4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	KLK11	Q9UBX7	282 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	C14orf166	Q9Y224	244 aa	Known RBP	4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	KCNIP3	Q9Y2W7	256 aa		4.63	□□□□□ -1.67
PTCD3-215	ENST00000484203	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	KIR2DL5B	A0A0G2JN68	375 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	KIR2DL5B	A0A0G2JPC4	375 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	IZUMO1R	A6ND01	250 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203		K7EIM0	57 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	GNG7	O60262	68 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	IFNA17	P01571	189 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	SMIM18	P0DKX4	95 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	FAU	P35544	74 aa	Known RBP	4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	RPL5	P46777	297 aa	Known RBP	4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	ALDH3B2	P48448	385 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	ATP5I	P56385	69 aa	Predicted RBP	4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	AP3S2	P59780	193 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	SRPX	P78539	464 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	FOXI1	Q12951	378 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	SCGB2B2	Q4G0G5	96 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	BTNL8	Q6UX41	500 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	ADAMTSL5	Q6ZMM2	481 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	KIR2DL5A	Q8N109	375 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	OR52E5	Q8NH55	327 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	OR52I2	Q8NH67	350 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	KIR2DL5B	Q8NHK3	375 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	SMIM4	Q8WVI0	70 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	IL22RA2	Q969J5	263 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	DIRAS2	Q96HU8	199 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	NARS2	Q96I59	477 aa	Known RBP	4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	C20orf24	Q9BUV8	137 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	GGTLC1	Q9BX51	225 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	HIPK2	Q9H2X6	1198 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	TMEM231	Q9H6L2	316 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	MLX	Q9UH92	298 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	SCP2D1	Q9UJQ7	156 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	TP53TG1	Q9Y2A0	90 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	NSG2	Q9Y328	171 aa		4.62	□□□□□ -1.67
PTCD3-215	ENST00000484203	TRAV30	A0A087WSZ9	112 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	TRAV14DV4	A0A0A6YYC5	116 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203		A0A1W2PS18	150 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203		I3L2K1	104 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	GSTZ1	O43708	216 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	TRIAP1	O43715	76 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	YIF1A	O95070	293 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	CDS2	O95674	445 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	MT-CO2	P00403	227 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	CTSG	P08311	255 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	CD7	P09564	240 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	AKAIN1	P0CW23	69 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	ANXA3	P12429	323 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	UCP1	P25874	307 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	HTR2B	P41595	481 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	HOXA1	P49639	335 aa	Predicted RBP	4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	EIF2B2	P49770	351 aa	Known RBP	4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	SPCS3	P61009	180 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	IL18	Q14116	193 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	AARD	Q4LEZ3	155 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	ETFRF1	Q6IPR1	90 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	UNQ9165/PRO28630	Q6UXU0	137 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203	C19orf35	Q6ZS72	473 aa		4.61	□□□□□ -1.67
PTCD3-215	ENST00000484203		Q6ZWC4	215 aa		4.61	□□□□□ -1.67

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