RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TRIM16LQ309B1 348 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 SCGB2B2Q4G0G5 96 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 GPR107Q5VW38 600 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 ARRDC1Q8N5I2 433 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 TMEM229BQ8NBD8 167 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 GINS3Q9BRX5 216 aa13.16□□□□□ -0.3
ATG4B-221ENST00000483778 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-221ENST00000483778 C6orf62Q9GZU0 229 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-221ENST00000483778 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-221ENST00000483778 CTDSP2O14595 271 aa13.15□□□□□ -0.3
ATG4B-221ENST00000483778 RAB3DO95716 219 aa13.15□□□□□ -0.3
ATG4B-221ENST00000483778 IGKV1-17P01599 117 aa13.15□□□□□ -0.3
ATG4B-221ENST00000483778 BSXQ3C1V8 233 aa13.15□□□□□ -0.3
ATG4B-221ENST00000483778 TIGITQ495A1 244 aa13.15□□□□□ -0.3
ATG4B-221ENST00000483778 GATAD1Q8WUU5 269 aa13.15□□□□□ -0.3
ATG4B-221ENST00000483778 COPZ2Q9P299 210 aa13.15□□□□□ -0.3
ATG4B-221ENST00000483778 KLK5Q9Y337 293 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-221ENST00000483778 CLN5O75503 358 aa13.14□□□□□ -0.31
ATG4B-221ENST00000483778 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-221ENST00000483778 NPPCP23582 126 aa13.14□□□□□ -0.31
ATG4B-221ENST00000483778 HOXA1P49639 335 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-221ENST00000483778 PAFAH1B2P68402 229 aa13.14□□□□□ -0.31
ATG4B-221ENST00000483778 RBMS2Q15434 407 aaKnown RBP13.14□□□□□ -0.31
ATG4B-221ENST00000483778 STEAP1BQ6NZ63 245 aa13.14□□□□□ -0.31
ATG4B-221ENST00000483778 ZFAND1Q8TCF1 268 aa13.14□□□□□ -0.31
ATG4B-221ENST00000483778 GLYATL2Q8WU03 294 aa13.14□□□□□ -0.31
ATG4B-221ENST00000483778 RABAC1Q9UI14 185 aa13.14□□□□□ -0.31
ATG4B-221ENST00000483778 K7EQG2 157 aa13.13□□□□□ -0.31
ATG4B-221ENST00000483778 OR5AC1P0C628 307 aa13.13□□□□□ -0.31
ATG4B-221ENST00000483778 SELENOHQ8IZQ5 122 aaKnown RBP13.13□□□□□ -0.31
ATG4B-221ENST00000483778 TMEM217Q8N7C4 229 aa13.13□□□□□ -0.31
ATG4B-221ENST00000483778 OR4X1Q8NH49 305 aa13.13□□□□□ -0.31
ATG4B-221ENST00000483778 TMEM170AQ8WVE7 144 aa13.13□□□□□ -0.31
ATG4B-221ENST00000483778 GPR146Q96CH1 333 aa13.13□□□□□ -0.31
ATG4B-221ENST00000483778 FBXL17Q9UF56 701 aa13.13□□□□□ -0.31
ATG4B-221ENST00000483778 KNCNA6PVL3 124 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 CDS2O95674 445 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 TBPP20226 339 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 CRYBB3P26998 211 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 OPRK1P41145 380 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 RPL5P46777 297 aaKnown RBP13.12□□□□□ -0.31
ATG4B-221ENST00000483778 SUB1P53999 127 aaKnown RBP eCLIP13.12□□□□□ -0.31
ATG4B-221ENST00000483778 MEF2DQ14814 521 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 SPCS2Q15005 226 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 C11orf45Q8TAV5 145 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 RRNAD1Q96FB5 475 aaKnown RBP13.12□□□□□ -0.31
ATG4B-221ENST00000483778 TMEM222Q9H0R3 208 aa13.12□□□□□ -0.31
ATG4B-221ENST00000483778 TEX13DA0A0J9YY54 714 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-221ENST00000483778 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
ATG4B-221ENST00000483778 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 P2RY1P47900 373 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 TAS2R19P59542 299 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 SPCS3P61009 180 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 PRR20EP86478 221 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 PRR20CP86479 221 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 PRR20DP86480 221 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 PRR20BP86481 221 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 PRR20AP86496 221 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
ATG4B-221ENST00000483778 AARDQ4LEZ3 155 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 CCDC71LQ8N9Z2 235 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 STXBP6Q8NFX7 210 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 AP3S1Q92572 193 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 TMEM230Q96A57 120 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 PDCD10Q9BUL8 212 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 PRR13Q9NZ81 148 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 U3KQE9 123 aa13.11□□□□□ -0.31
ATG4B-221ENST00000483778 TRAV2A0A0B4J234 112 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 GABARAPH6UMI1 98 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 ATG12O94817 140 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 NXPH3O95157 252 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 CD5P06127 495 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 TMEM187Q14656 261 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 RNASE11Q8TAA1 199 aaKnown RBP13.1□□□□□ -0.31
ATG4B-221ENST00000483778 DCANP1Q8TF63 244 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 C11orf68Q9H3H3 251 aaKnown RBP13.1□□□□□ -0.31
ATG4B-221ENST00000483778 ENY2Q9NPA8 101 aa13.1□□□□□ -0.31
ATG4B-221ENST00000483778 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-221ENST00000483778 VPS13DQ5THJ4 4388 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 CORTO00230 105 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 IGLC1P0CG04 106 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 C4BPBP20851 252 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 ALDH3B2P48448 385 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 LGALS9CQ6DKI2 356 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 PRSS54Q6PEW0 395 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 TRPT1Q86TN4 253 aaKnown RBP13.09□□□□□ -0.31
ATG4B-221ENST00000483778 STHQ8IWL8 128 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 Q8NAQ8 132 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 METTL26Q96S19 204 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 NAA60Q9H7X0 242 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 HEYLQ9NQ87 328 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-221ENST00000483778 CACNG5Q9UF02 275 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 GPR132Q9UNW8 380 aa13.09□□□□□ -0.31
ATG4B-221ENST00000483778 DNAH10Q8IVF4 4471 aa13.08□□□□□ -0.32
ATG4B-221ENST00000483778 RGS5O15539 181 aa13.08□□□□□ -0.32
ATG4B-221ENST00000483778 RND2P52198 227 aa13.08□□□□□ -0.32
ATG4B-221ENST00000483778 DHODHQ02127 395 aa13.08□□□□□ -0.32
ATG4B-221ENST00000483778 OR4C16Q8NGL9 310 aa13.08□□□□□ -0.32
ATG4B-221ENST00000483778 OR52E5Q8NH55 327 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms