RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 IGKV1-6A0A0C4DH72 117 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 IGKV1-12A0A0C4DH73 117 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 K7EMI3 77 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 FOXH1O75593 365 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 IGKV1D-12P01611 117 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 DAZAP2Q15038 168 aaPredicted RBP6.43□□□□□ -1.38
COL4A5-205ENST00000483338 FAM162BQ5T6X4 162 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 NUP35Q8NFH5 326 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 COX14Q96I36 57 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 EMC6Q9BV81 110 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 ZNF442Q9H7R0 627 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 AKIRIN1Q9H9L7 192 aaPredicted RBP6.43□□□□□ -1.38
COL4A5-205ENST00000483338 LOXL2Q9Y4K0 774 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 AHCTF1Q8WYP5 2266 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 IGLL5B9A064 214 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 DHRS3O75911 302 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 IGLV3-1P01715 115 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 RBP4P02753 201 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 RPS21P63220 83 aaKnown RBP6.43□□□□□ -1.38
COL4A5-205ENST00000483338 BCL6BQ8N143 479 aaPredicted RBP6.43□□□□□ -1.38
COL4A5-205ENST00000483338 ZADH2Q8N4Q0 377 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 C8orf46Q8TAG6 207 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 FAM90A26D6RGX4 464 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 THBDP07204 575 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 SRD5A1P18405 259 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 GCHFRP30047 84 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 MOGAT3Q86VF5 341 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 C1orf210Q8IVY1 113 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 COL25A1Q9BXS0 654 aaPredicted RBP6.43□□□□□ -1.38
COL4A5-205ENST00000483338 PRTFDC1Q9NRG1 225 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 IL36RNQ9UBH0 155 aa6.43□□□□□ -1.38
COL4A5-205ENST00000483338 TPRP12270 2363 aaKnown RBP6.42□□□□□ -1.38
COL4A5-205ENST00000483338 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.42□□□□□ -1.38
COL4A5-205ENST00000483338 RHODO00212 210 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 TGFAP01135 160 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 MALLQ13021 153 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 MFAP5Q13361 173 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 NHP2Q9NX24 153 aaKnown RBP6.42□□□□□ -1.38
COL4A5-205ENST00000483338 FNDC10F2Z333 226 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 UTS2O95399 124 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
COL4A5-205ENST00000483338 OSR2Q8N2R0 312 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 AJUBAQ96IF1 538 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 IDI2-AS1Q9NZ38 188 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 TMED7-TICAM2A0A0A6YYA0 188 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 TRAV5A0A0B4J249 113 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 SLC25A5P05141 298 aaKnown RBP6.42□□□□□ -1.38
COL4A5-205ENST00000483338 CELA2BP08218 269 aaPredicted RBP6.42□□□□□ -1.38
COL4A5-205ENST00000483338 FAM159AQ6UWV7 190 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 ATP6V0E2Q8NHE4 81 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 NUDT22Q9BRQ3 303 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 ZNF355PQ9NSJ1 428 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 ASXL3Q9C0F0 2248 aa6.42□□□□□ -1.38
COL4A5-205ENST00000483338 CUL9Q8IWT3 2517 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 PRSS38A1L453 326 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 H3BML4 177 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 KIR2DS3K7RE56 304 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 CD27P26842 260 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 PPP1CAP62136 330 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 SRSF1Q07955 248 aaKnown RBP eCLIP6.41□□□□□ -1.385e-6■■■□□ 16.5
COL4A5-205ENST00000483338 KIR2DS3Q14952 304 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 NHLRC2Q8NBF2 726 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 ZNF747Q9BV97 191 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 SMIM9A6NGZ8 99 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 IGHG4P01861 327 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 H1FNTQ75WM6 255 aaPredicted RBP6.41□□□□□ -1.38
COL4A5-205ENST00000483338 PPP1R35Q8TAP8 253 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 PLPPR2Q96GM1 343 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 TRIB1Q96RU8 372 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 AGRNO00468 2067 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 USF3Q68DE3 2245 aa6.41□□□□□ -1.38
COL4A5-205ENST00000483338 TEX50A0A1B0GTY4 177 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 A8MWL6 223 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 DSCR4P56555 118 aaPredicted RBP6.4□□□□□ -1.38
COL4A5-205ENST00000483338 OR5AN1Q8NGI8 311 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 ZDHHC16Q969W1 377 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 CDH23Q9H251 3354 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 CEP250Q9BV73 2442 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 CACNA1HO95180 2353 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 A0A1B0GXF2 115 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 FAM90A18PA6NE21 464 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 FAM90A16PA6NEW6 464 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 FAM90A8PA6NJQ4 464 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 FAM90A9PA6NNJ1 464 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 PRRG2O14669 202 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 ZG16O60844 167 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 AREGP15514 252 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 PRSS12P56730 875 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 CARD19Q96LW7 228 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 IGF2BP2-AS1Q96M15 143 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 TMUB1Q9BVT8 246 aa6.4□□□□□ -1.38
COL4A5-205ENST00000483338 LIN7CQ9NUP9 197 aaKnown RBP6.4□□□□□ -1.38
COL4A5-205ENST00000483338 LSM4Q9Y4Z0 139 aaKnown RBP6.4□□□□□ -1.38
COL4A5-205ENST00000483338 CHD9Q3L8U1 2897 aa6.4□□□□□ -1.39
COL4A5-205ENST00000483338 TCRBV4S1A1TA0A5B7 111 aa6.4□□□□□ -1.39
COL4A5-205ENST00000483338 MGST3O14880 152 aa6.4□□□□□ -1.39
COL4A5-205ENST00000483338 IGLV2-14P01704 120 aa6.4□□□□□ -1.39
COL4A5-205ENST00000483338 NMUP48645 174 aa6.4□□□□□ -1.39
COL4A5-205ENST00000483338 MEIG1Q5JSS6 88 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms