RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 GABARAPH6UMI1 98 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 DNASE2O00115 360 aaPredicted RBP10.12□□□□□ -0.79
VARS-226ENST00000483275 GIG44P09565 113 aaPredicted RBP10.12□□□□□ -0.79
VARS-226ENST00000483275 RBMY1A1P0DJD3 496 aaKnown RBP10.12□□□□□ -0.79
VARS-226ENST00000483275 RBMY1CP0DJD4 496 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 C4BPBP20851 252 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 PRCDQ00LT1 54 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 RBMY1FQ15415 496 aaKnown RBP10.12□□□□□ -0.79
VARS-226ENST00000483275 H2BFWTQ7Z2G1 175 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 OR4A16Q8NH70 328 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 FKBP11Q9NYL4 201 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 KLK11Q9UBX7 282 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 APLNQ9ULZ1 77 aa10.12□□□□□ -0.79
VARS-226ENST00000483275 PUS1Q9Y606 427 aaKnown RBP eCLIP10.12□□□□□ -0.79
VARS-226ENST00000483275 DNAH2Q9P225 4427 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 KNCNA6PVL3 124 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 TBPP20226 339 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 S100A5P33763 92 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 TAS2R19P59542 299 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 SSBP1Q04837 148 aaKnown RBP10.11□□□□□ -0.79
VARS-226ENST00000483275 ZNF114Q8NC26 417 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 ABHD1Q96SE0 405 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 TSC22D3Q99576 134 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 SLIRPQ9GZT3 109 aaKnown RBP10.11□□□□□ -0.79
VARS-226ENST00000483275 VSIRQ9H7M9 311 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 CLEC5AQ9NY25 188 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 MRPL36Q9P0J6 103 aaKnown RBP10.11□□□□□ -0.79
VARS-226ENST00000483275 MTFP1Q9UDX5 166 aa10.11□□□□□ -0.79
VARS-226ENST00000483275 M0QYG6 137 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 ZNF688P0C7X2 276 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 PI3P19957 117 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 PPP5CP53041 499 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 PAFAH1B2P68402 229 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 Q6ZTC4 211 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 ZNF767PQ75MW2 155 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 STHQ8IWL8 128 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 TMEM229BQ8NBD8 167 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 TXN2Q99757 166 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 GINS3Q9BRX5 216 aa10.1□□□□□ -0.79
VARS-226ENST00000483275 FABP12A6NFH5 140 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 ZNF701M0R085 212 aaPredicted RBP10.09□□□□□ -0.79
VARS-226ENST00000483275 CTDSPLO15194 276 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 RAB3DO95716 219 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 IGKV1-5P01602 117 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 CD3DP04234 171 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 PGAM2P15259 253 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 HLA-DMBP28068 263 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
VARS-226ENST00000483275 CADM3Q8N126 398 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 ARRDC1Q8N5I2 433 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 SCRT1Q9BWW7 348 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 CELA1Q9UNI1 258 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 RYR1P21817 5038 aa10.09□□□□□ -0.79
VARS-226ENST00000483275 ELOA3CA0A087WX78 387 aaPredicted RBP10.08□□□□□ -0.8
VARS-226ENST00000483275 DISC1C4P0D8 188 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 UCP3P55916 312 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 HSPE1P61604 102 aaKnown RBP10.08□□□□□ -0.8
VARS-226ENST00000483275 MEF2DQ14814 521 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 MLANAQ16655 118 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 SCGB2B2Q4G0G5 96 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 STEAP1BQ6NZ63 245 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 ZNF600Q6ZNG1 722 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 TRPT1Q86TN4 253 aaKnown RBP10.08□□□□□ -0.8
VARS-226ENST00000483275 SLC35G3Q8N808 338 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 SMIM4Q8WVI0 70 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 NDUFA13Q9P0J0 144 aa10.08□□□□□ -0.8
VARS-226ENST00000483275 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 K7EQG2 157 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 AKAIN1P0CW23 69 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 TNFSF8P32971 234 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 P2RY1P47900 373 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 NPBWR1P48145 328 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 ERHP84090 104 aaKnown RBP10.07□□□□□ -0.8
VARS-226ENST00000483275 ACTL10Q5JWF8 245 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 DUSP18Q8NEJ0 188 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 ZNF486Q96H40 463 aaPredicted RBP10.07□□□□□ -0.8
VARS-226ENST00000483275 TP53RKQ96S44 253 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 RBM38Q9H0Z9 239 aaKnown RBP10.07□□□□□ -0.8
VARS-226ENST00000483275 FNDC4Q9H6D8 234 aaPredicted RBP10.07□□□□□ -0.8
VARS-226ENST00000483275 X6R8D5 127 aa10.07□□□□□ -0.8
VARS-226ENST00000483275 A0A0B4J293 547 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 TMEM50AO95807 157 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 CD74P04233 296 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 RNASE2P10153 161 aaKnown RBP10.06□□□□□ -0.8
VARS-226ENST00000483275 SNCAP37840 140 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 ETV6P41212 452 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 HOXA1P49639 335 aaPredicted RBP10.06□□□□□ -0.8
VARS-226ENST00000483275 AKR1C2P52895 323 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 TIGITQ495A1 244 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 PYDC2Q56P42 97 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 CCDC71LQ8N9Z2 235 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 ZFAND1Q8TCF1 268 aa10.06□□□□□ -0.8
VARS-226ENST00000483275 PKD1P98161 4303 aa10.05□□□□□ -0.8
VARS-226ENST00000483275 A0A0G2JRQ6 117 aa10.05□□□□□ -0.8
VARS-226ENST00000483275 GSTZ1O43708 216 aaPredicted RBP10.05□□□□□ -0.8
VARS-226ENST00000483275 IFNA17P01571 189 aa10.05□□□□□ -0.8
VARS-226ENST00000483275 P0C879 139 aa10.05□□□□□ -0.8
VARS-226ENST00000483275 NPPCP23582 126 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms