RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 BANF2Q9H503 90 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 Q9H521 79 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 LINC00574Q9H8X3 128 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 PLEKHJ1Q9NW61 149 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 CALYQ9NYX4 217 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 TECRQ9NZ01 308 aaKnown RBP4.5□□□□□ -1.69
CHD6-209ENST00000482596 IDI2-AS1Q9NZ38 188 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 ZNF581Q9P0T4 197 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 PSG11Q9UQ72 335 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 TMED3Q9Y3Q3 217 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 NUBP2Q9Y5Y2 271 aa4.5□□□□□ -1.69
CHD6-209ENST00000482596 M0R036 132 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 AIPO00170 330 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 ORC5O43913 435 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 MRPS14O60783 128 aaKnown RBP4.49□□□□□ -1.69
CHD6-209ENST00000482596 CA11O75493 328 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 CRYZL1O95825 349 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 MT-ND4P03905 459 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 GAPDHP04406 335 aaKnown RBP4.49□□□□□ -1.69
CHD6-209ENST00000482596 UCHL1P09936 223 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 PMCHP20382 165 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 HTR2CP28335 458 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 SSTR5P35346 364 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 MAP2K4P45985 399 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 GABARAPL2P60520 117 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 RPS25P62851 125 aaKnown RBP4.49□□□□□ -1.69
CHD6-209ENST00000482596 PSG5Q15238 335 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 MMDQ15546 238 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 LTC4SQ16873 150 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 C1orf100Q5SVJ3 147 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 UQCC3Q6UW78 93 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 ZNF497Q6ZNH5 498 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 TMEM91Q6ZNR0 172 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 ZFP82Q8N141 532 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 OR6M1Q8NGM8 313 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 OR4A4PQ8NGN8 299 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 OR52E5Q8NH55 327 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 OR52I2Q8NH67 350 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 RFESDQ8TAC1 157 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 CCDC107Q8WV48 283 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 ARL11Q969Q4 196 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 FNDC4Q9H6D8 234 aaPredicted RBP4.49□□□□□ -1.69
CHD6-209ENST00000482596 ACOT13Q9NPJ3 140 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 GSN-AS1Q9NRJ2 163 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 CCDC59Q9P031 241 aaKnown RBP4.49□□□□□ -1.69
CHD6-209ENST00000482596 RCC2Q9P258 522 aaKnown RBP4.49□□□□□ -1.69
CHD6-209ENST00000482596 C11orf21Q9P2W6 132 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 GNG12Q9UBI6 72 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 SMPXQ9UHP9 88 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 ZNF221Q9UK13 617 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 TRAPPC2LQ9UL33 140 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 PEX16Q9Y5Y5 336 aa4.49□□□□□ -1.69
CHD6-209ENST00000482596 TRAV39A0A0B4J263 110 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 C15orf65H3BRN8 121 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 H3BTX0 84 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 SDCBPO00560 298 aaPredicted RBP4.48□□□□□ -1.69
CHD6-209ENST00000482596 SLC22A1O15245 554 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 SPINT2O43291 252 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 PDCD6O75340 191 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 CD37P11049 281 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 FABP5Q01469 135 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 GAGE2BQ13066 116 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 TMEM187Q14656 261 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 GAGE2EQ4V326 116 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 SYT6Q5T7P8 510 aaPredicted RBP4.48□□□□□ -1.69
CHD6-209ENST00000482596 GAGE2AQ6NT46 116 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 UNQ5815/PRO19632Q6UWF5 114 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 GAPTQ8N292 157 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 ZNF738Q8NE65 137 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 OR10X1Q8NGY0 326 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 OR4K15Q8NH41 348 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 NEDD4LQ96PU5 975 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 TMEM59Q9BXS4 323 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 PLGRKTQ9HBL7 147 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 KCNIP1Q9NZI2 227 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
CHD6-209ENST00000482596 AK6Q9Y3D8 172 aaKnown RBP4.48□□□□□ -1.69
CHD6-209ENST00000482596 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 TRBV7-9A0A0J9YWB2 115 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 TMEM14DPA8MWL7 114 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 SLC17A2O00624 439 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 PDCD5O14737 125 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 CA1P00915 261 aaPredicted RBP4.47□□□□□ -1.69
CHD6-209ENST00000482596 TCRBP04435 133 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 GSTT2P0CG29 244 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 GSTT2BP0CG30 244 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 PET100P0DJ07 73 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 CBLN1P23435 193 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 MYL9P24844 172 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 IL3RAP26951 378 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 QRFPP83859 136 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 IDNKQ5T6J7 187 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 HACD4Q5VWC8 232 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 C22orf42Q6IC83 251 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 OR10K2Q6IF99 312 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 ZNF343Q6P1L6 599 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 CD200R1LQ6Q8B3 271 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 GSG1LQ6UXU4 331 aa4.47□□□□□ -1.69
CHD6-209ENST00000482596 ZNF554Q86TJ5 538 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms