RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 AMY1AP04745 511 aa7.89□□□□□ -1.15
GARNL3-216ENST00000481242 LDLRAD2Q5SZI1 272 aa7.89□□□□□ -1.15
GARNL3-216ENST00000481242 CLEC19AQ6UXS0 136 aa7.89□□□□□ -1.15
GARNL3-216ENST00000481242 AURKAIP1Q9NWT8 199 aaPredicted RBP7.89□□□□□ -1.15
GARNL3-216ENST00000481242 ZSWIM8A7E2V4 1837 aa7.89□□□□□ -1.15
GARNL3-216ENST00000481242 FOXI3A8MTJ6 420 aaPredicted RBP7.89□□□□□ -1.15
GARNL3-216ENST00000481242 BTCP35070 178 aa7.89□□□□□ -1.15
GARNL3-216ENST00000481242 TMEM242Q9NWH2 141 aa7.89□□□□□ -1.15
GARNL3-216ENST00000481242 ZNF257Q9Y2Q1 563 aa7.89□□□□□ -1.15
GARNL3-216ENST00000481242 ZNF646O15015 1829 aaPredicted RBP7.88□□□□□ -1.15
GARNL3-216ENST00000481242 TRAV9-1A0A075B6T8 112 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 IGHV3-35A0A0C4DH35 117 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 IFITM10A6NMD0 228 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 ZNF324O75467 553 aaPredicted RBP7.88□□□□□ -1.15
GARNL3-216ENST00000481242 HLA-DRB1P01911 266 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 ZNF56Q15929 161 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 LYZL4Q96KX0 146 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 TRAV40A0A0B4J280 105 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 RRHO14718 337 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 PRCDQ00LT1 54 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 OR10S1Q8NGN2 331 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 ITLN2Q8WWU7 325 aaPredicted RBP7.88□□□□□ -1.15
GARNL3-216ENST00000481242 RCC1LQ96I51 464 aaKnown RBP7.88□□□□□ -1.15
GARNL3-216ENST00000481242 TBL2Q9Y4P3 447 aaKnown RBP7.88□□□□□ -1.15
GARNL3-216ENST00000481242 BDP1A6H8Y1 2624 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 DUTP33316 252 aaKnown RBP7.88□□□□□ -1.15
GARNL3-216ENST00000481242 LRTM2Q8N967 370 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 OR10AG1Q8NH19 301 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 FMC1Q96HJ9 113 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 ASCL2Q99929 193 aa7.88□□□□□ -1.15
GARNL3-216ENST00000481242 MRPS16Q9Y3D3 137 aaKnown RBP7.88□□□□□ -1.15
GARNL3-216ENST00000481242 TIMM23O14925 209 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 SNRPCP09234 159 aaKnown RBP7.87□□□□□ -1.15
GARNL3-216ENST00000481242 CKS1BP61024 79 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 ZNF506Q5JVG8 444 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 RTBDNQ9BSG5 229 aaPredicted RBP7.87□□□□□ -1.15
GARNL3-216ENST00000481242 MEGF9Q9H1U4 602 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 PARLQ9H300 379 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 NPFFO15130 113 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 KLK2P20151 261 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 RHOGP84095 191 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 ZNF502Q8TBZ5 544 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BLQ99880 126 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 FREM3P0C091 2139 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 TCRBV4S1A1TA0A5B7 111 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 SPSB3Q6PJ21 355 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 GEMIN7Q9H840 131 aaKnown RBP7.87□□□□□ -1.15
GARNL3-216ENST00000481242 TNFRSF18Q9Y5U5 241 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 HEATR1Q9H583 2144 aaKnown RBP7.87□□□□□ -1.15
GARNL3-216ENST00000481242 CRXO43186 299 aaPredicted RBP7.87□□□□□ -1.15
GARNL3-216ENST00000481242 LEPROTL1O95214 131 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 IGKV3-15P01624 115 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 IGFBP2P18065 325 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 B3GALT5-AS1P59052 145 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 TMEM101Q96IK0 257 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 PGLYRP4Q96LB8 373 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 DERL1Q9BUN8 251 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 OTORQ9NRC9 128 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 SPANXCQ9NY87 97 aa7.87□□□□□ -1.15
GARNL3-216ENST00000481242 TRAV14DV4A0A0A6YYC5 116 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 FOXL2NBQ6ZUU3 175 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 TMEM167AQ8TBQ9 72 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 RNF125Q96EQ8 232 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 IMMP2LQ96T52 175 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 LOC389332A0A1B0GUA5 103 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 RNF222A6NCQ9 220 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 PEX7O00628 323 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BKO60814 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 CLPSP04118 112 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BJP06899 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 IGHV1-8P0DP01 117 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BOP23527 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BBP33778 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 LEPP41159 167 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BDP58876 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BCP62807 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HBBP68871 147 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST2H2BEQ16778 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 FNDC1Q4ZHG4 1894 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-216ENST00000481242 CENPWQ5EE01 88 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-216ENST00000481242 FAM71F2Q6NXP2 309 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 ZCCHC24Q8N2G6 241 aaKnown RBP7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BHQ93079 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 DUX3Q96PT4 197 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BNQ99877 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 HIST1H2BMQ99879 126 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 SDF2L1Q9HCN8 221 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 IGHV2-26A0A0B4J1V2 119 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 IGHV3-48P01763 117 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 SOD3P08294 240 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 MED12Q93074 2177 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 TRBV6-6A0A0A6YYG2 114 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 TRAV41A0A0B4J266 112 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 LYNX1G3V0Z9 82 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 ETV2O00321 342 aaPredicted RBP7.86□□□□□ -1.15
GARNL3-216ENST00000481242 LYNX1P0DP58 116 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 TMEM42Q69YG0 159 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 STHQ8IWL8 128 aa7.86□□□□□ -1.15
GARNL3-216ENST00000481242 FGFBP3Q8TAT2 258 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms