RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 SPCS3P61009 180 aa15.2■□□□□ 0.02
VPS36-204ENST00000480923 TXN2Q99757 166 aa15.2■□□□□ 0.02
VPS36-204ENST00000480923 C20orf24Q9BUV8 137 aa15.2■□□□□ 0.02
VPS36-204ENST00000480923 TUBA4BQ9H853 241 aa15.2■□□□□ 0.02
VPS36-204ENST00000480923 GPN1Q9HCN4 374 aaPredicted RBP15.2■□□□□ 0.02
VPS36-204ENST00000480923 MRPL27Q9P0M9 148 aaKnown RBP15.2■□□□□ 0.02
VPS36-204ENST00000480923 C9orf170A2RU37 121 aa15.19■□□□□ 0.02
VPS36-204ENST00000480923 CTSGP08311 255 aa15.19■□□□□ 0.02
VPS36-204ENST00000480923 RNASE2P10153 161 aaKnown RBP15.19■□□□□ 0.02
VPS36-204ENST00000480923 SUPT4H1P63272 117 aaKnown RBP15.19■□□□□ 0.02
VPS36-204ENST00000480923 DHRS2Q13268 280 aa15.19■□□□□ 0.02
VPS36-204ENST00000480923 LYG2Q86SG7 212 aa15.19■□□□□ 0.02
VPS36-204ENST00000480923 TMEM61Q8N0U2 210 aa15.19■□□□□ 0.02
VPS36-204ENST00000480923 OR52E5Q8NH55 327 aa15.19■□□□□ 0.02
VPS36-204ENST00000480923 NEURL2Q9BR09 285 aa15.19■□□□□ 0.02
VPS36-204ENST00000480923 C19orf73Q9NVV2 129 aa15.19■□□□□ 0.02
VPS36-204ENST00000480923 IGHV3OR16-8A0A075B7F1 116 aa15.18■□□□□ 0.02
VPS36-204ENST00000480923 CEBPZOSA8MTT3 80 aa15.18■□□□□ 0.02
VPS36-204ENST00000480923 A8MZ25 164 aa15.18■□□□□ 0.02
VPS36-204ENST00000480923 GNG7O60262 68 aa15.18■□□□□ 0.02
VPS36-204ENST00000480923 C8orf88P0DMB2 117 aa15.18■□□□□ 0.02
VPS36-204ENST00000480923 FCGR2BP31994 310 aaPredicted RBP15.18■□□□□ 0.02
VPS36-204ENST00000480923 SRPXP78539 464 aa15.18■□□□□ 0.02
VPS36-204ENST00000480923 RELQ04864 619 aaPredicted RBP15.18■□□□□ 0.02
VPS36-204ENST00000480923 AARDQ4LEZ3 155 aa15.18■□□□□ 0.02
VPS36-204ENST00000480923 LGI3Q8N145 548 aa15.18■□□□□ 0.02
VPS36-204ENST00000480923 DAZ1Q9NQZ3 744 aaKnown RBP15.18■□□□□ 0.02
VPS36-204ENST00000480923 PIGBOS1A0A0B4J2F0 54 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 CORTO00230 105 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 YIF1AO95070 293 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 NXPH3O95157 252 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 CD7P09564 240 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 SULT1A3P0DMM9 295 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 SULT1A4P0DMN0 295 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 NPBWR1P48145 328 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 COQ8AQ8NI60 647 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 ZNF431Q8TF32 576 aaPredicted RBP15.17■□□□□ 0.02
VPS36-204ENST00000480923 WWC2-AS2Q96NR7 200 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 SEC22CQ9BRL7 303 aa15.17■□□□□ 0.02
VPS36-204ENST00000480923 HEYLQ9NQ87 328 aaPredicted RBP15.17■□□□□ 0.02
VPS36-204ENST00000480923 COL7A1Q02388 2944 aa15.16■□□□□ 0.02
VPS36-204ENST00000480923 A0A0B4J2A0 478 aa15.16■□□□□ 0.02
VPS36-204ENST00000480923 SNRPGP15A8MWD9 76 aa15.16■□□□□ 0.02
VPS36-204ENST00000480923 ZNF207O43670 478 aaKnown RBP15.16■□□□□ 0.02
VPS36-204ENST00000480923 SCAF4O95104 1147 aaKnown RBP15.16■□□□□ 0.02
VPS36-204ENST00000480923 RBPMS2Q6ZRY4 209 aaKnown RBP15.16■□□□□ 0.02
VPS36-204ENST00000480923 LYZL2Q7Z4W2 148 aa15.16■□□□□ 0.02
VPS36-204ENST00000480923 OR52B4Q8NGK2 314 aa15.16■□□□□ 0.02
VPS36-204ENST00000480923 ZMAT4Q9H898 229 aa15.16■□□□□ 0.02
VPS36-204ENST00000480923 SHPKQ9UHJ6 478 aa15.16■□□□□ 0.02
VPS36-204ENST00000480923 OPRK1P41145 380 aa15.15■□□□□ 0.02
VPS36-204ENST00000480923 HTR2BP41595 481 aa15.15■□□□□ 0.02
VPS36-204ENST00000480923 PVRIGQ6DKI7 326 aa15.15■□□□□ 0.02
VPS36-204ENST00000480923 SLC16A13Q7RTY0 426 aa15.15■□□□□ 0.02
VPS36-204ENST00000480923 MITD1Q8WV92 249 aa15.15■□□□□ 0.02
VPS36-204ENST00000480923 CACFD1Q9UGQ2 172 aa15.15■□□□□ 0.02
VPS36-204ENST00000480923 TRAV25A0A0B4J276 109 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 C7orf66A4D0T2 115 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 C15orf62A8K5M9 175 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 K7EMT4 169 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 SMCO1Q147U7 214 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 BSXQ3C1V8 233 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 NMSQ5H8A3 153 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 Q6ZNX1 250 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 DEFB125Q8N687 156 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 RCHY1Q96PM5 261 aa15.14■□□□□ 0.01
VPS36-204ENST00000480923 OR11H12B2RN74 326 aa15.13■□□□□ 0.01
VPS36-204ENST00000480923 ANKRD55Q3KP44 614 aa15.13■□□□□ 0.01
VPS36-204ENST00000480923 C12orf45Q8N5I9 185 aaPredicted RBP15.13■□□□□ 0.01
VPS36-204ENST00000480923 LRTM2Q8N967 370 aa15.13■□□□□ 0.01
VPS36-204ENST00000480923 WFDC10AQ9H1F0 79 aa15.13■□□□□ 0.01
VPS36-204ENST00000480923 HIPK2Q9H2X6 1198 aa15.13■□□□□ 0.01
VPS36-204ENST00000480923 ALG5Q9Y673 324 aa15.13■□□□□ 0.01
VPS36-204ENST00000480923 MLANAQ16655 118 aa15.12■□□□□ 0.01
VPS36-204ENST00000480923 LAMTOR1Q6IAA8 161 aa15.12■□□□□ 0.01
VPS36-204ENST00000480923 SLC24A4Q8NFF2 622 aa15.12■□□□□ 0.01
VPS36-204ENST00000480923 OR1S1Q8NH92 325 aa15.12■□□□□ 0.01
VPS36-204ENST00000480923 ZNF414Q96IQ9 312 aa15.12■□□□□ 0.01
VPS36-204ENST00000480923 FNDC4Q9H6D8 234 aaPredicted RBP15.12■□□□□ 0.01
VPS36-204ENST00000480923 DUXBA0A1W2PPF3 345 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 RPS10-NUDT3A0A1W2PQS6 291 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 SSNA1O43805 119 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 TMEM50AO95807 157 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 TNFRSF9Q07011 255 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 HAGHQ16775 308 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 C2orf83Q53S99 150 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 TM2D3Q9BRN9 247 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 SRD5A3Q9H8P0 318 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 SMPXQ9UHP9 88 aa15.11■□□□□ 0.01
VPS36-204ENST00000480923 IGHV3-49A0A0A0MS15 119 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 IGHV7-4-1A0A0J9YVY3 117 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 A0A1B0GU03 582 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 CLN5O75503 358 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 SCGB2A1O75556 95 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 ZNF600Q6ZNG1 722 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 TMEM116Q8NCL8 245 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 OR4X1Q8NH49 305 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 DTD1Q8TEA8 209 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 OR10C1Q96KK4 312 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 SPAG8Q99932 426 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms