RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TAS2R19P59542 299 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 SSBP1Q04837 148 aaKnown RBP11.24□□□□□ -0.61
LIMS3-203ENST00000480744 TOMM20LQ6UXN7 152 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 ARRDC1Q8N5I2 433 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 OR4C16Q8NGL9 310 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 RNASE11Q8TAA1 199 aaKnown RBP11.24□□□□□ -0.61
LIMS3-203ENST00000480744 ST8SIA2Q92186 375 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 CSTL1Q9H114 145 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 COPZ2Q9P299 210 aa11.24□□□□□ -0.61
LIMS3-203ENST00000480744 A0A0B4J293 547 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 ANKRD20A5PA0PJZ0 165 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 A6NHS1 94 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
LIMS3-203ENST00000480744 RAB3DO95716 219 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 ETV6P41212 452 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 RPL11P62913 178 aaKnown RBP11.23□□□□□ -0.61
LIMS3-203ENST00000480744 SP6Q3SY56 376 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 FAM90A2PQ658T7 463 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 ZNF600Q6ZNG1 722 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 ENY2Q9NPA8 101 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 RABL2AQ9UBK7 228 aaPredicted RBP11.23□□□□□ -0.61
LIMS3-203ENST00000480744 RABL2BQ9UNT1 228 aa11.23□□□□□ -0.61
LIMS3-203ENST00000480744 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
LIMS3-203ENST00000480744 PUS1Q9Y606 427 aaKnown RBP eCLIP11.23□□□□□ -0.61
LIMS3-203ENST00000480744 DFFBO76075 338 aa11.22□□□□□ -0.61
LIMS3-203ENST00000480744 APOHP02749 345 aaPredicted RBP11.22□□□□□ -0.61
LIMS3-203ENST00000480744 S100A5P33763 92 aa11.22□□□□□ -0.61
LIMS3-203ENST00000480744 SUB1P53999 127 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIMS3-203ENST00000480744 ZFAND1Q8TCF1 268 aa11.22□□□□□ -0.61
LIMS3-203ENST00000480744 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
LIMS3-203ENST00000480744 TMEM50AO95807 157 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 CD5P06127 495 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 P0C879 139 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 AKAIN1P0CW23 69 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 RNASE2P10153 161 aaKnown RBP11.21□□□□□ -0.61
LIMS3-203ENST00000480744 ATF4P18848 351 aaPredicted RBP11.21□□□□□ -0.61
LIMS3-203ENST00000480744 PYDC2Q56P42 97 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 LEMD1Q68G75 181 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 LILRB2Q8N423 598 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 OR13C8Q8NGS7 320 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 TERB2Q8NHR7 220 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 MARCH1Q8TCQ1 289 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 SDHCQ99643 169 aaPredicted RBP11.21□□□□□ -0.61
LIMS3-203ENST00000480744 RARRES2Q99969 163 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 SRRQ9GZT4 340 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 VSIRQ9H7M9 311 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.61
LIMS3-203ENST00000480744 AGRNO00468 2067 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 A0A1B0GU03 582 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 CORTO00230 105 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 CA1P00915 261 aaPredicted RBP11.2□□□□□ -0.62
LIMS3-203ENST00000480744 OPRK1P41145 380 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 DEFB131AP59861 70 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 KLF9Q13886 244 aaPredicted RBP11.2□□□□□ -0.62
LIMS3-203ENST00000480744 OR11H2Q8NH07 326 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 GATAD1Q8WUU5 269 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 PHLDA1Q8WV24 401 aaPredicted RBP11.2□□□□□ -0.62
LIMS3-203ENST00000480744 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
LIMS3-203ENST00000480744 A0A0G2JRQ6 117 aa11.19□□□□□ -0.62
LIMS3-203ENST00000480744 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
LIMS3-203ENST00000480744 NPPCP23582 126 aa11.19□□□□□ -0.62
LIMS3-203ENST00000480744 UCP1P25874 307 aa11.19□□□□□ -0.62
LIMS3-203ENST00000480744 MEF2DQ14814 521 aa11.19□□□□□ -0.62
LIMS3-203ENST00000480744 FAM24BQ8N5W8 94 aa11.19□□□□□ -0.62
LIMS3-203ENST00000480744 OR51S1Q8NGJ8 323 aa11.19□□□□□ -0.62
LIMS3-203ENST00000480744 TMEM230Q96A57 120 aa11.19□□□□□ -0.62
LIMS3-203ENST00000480744 MRPL36Q9P0J6 103 aaKnown RBP11.19□□□□□ -0.62
LIMS3-203ENST00000480744 CLN5O75503 358 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 SCGB2A1O75556 95 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 OR5AC1P0C628 307 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 NANOS2P60321 138 aaKnown RBP11.18□□□□□ -0.62
LIMS3-203ENST00000480744 MLANAQ16655 118 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 CNPY1Q3B7I2 92 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 SPANXN2Q5MJ10 180 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 STXBP6Q8NFX7 210 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 METTL26Q96S19 204 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 FNDC4Q9H6D8 234 aaPredicted RBP11.18□□□□□ -0.62
LIMS3-203ENST00000480744 FBXL17Q9UF56 701 aa11.18□□□□□ -0.62
LIMS3-203ENST00000480744 C14orf166Q9Y224 244 aaKnown RBP11.18□□□□□ -0.62
LIMS3-203ENST00000480744 TEX13DA0A0J9YY54 714 aaPredicted RBP11.17□□□□□ -0.62
LIMS3-203ENST00000480744 A0A1W2PS18 150 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 DEFB4AO15263 64 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 TMEM187Q14656 261 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 BAK1Q16611 211 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 TIGITQ495A1 244 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 Q6ZRM9 215 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 STHQ8IWL8 128 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 OR4X1Q8NH49 305 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 C11orf45Q8TAV5 145 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 NARS2Q96I59 477 aaKnown RBP11.17□□□□□ -0.62
LIMS3-203ENST00000480744 RTBDNQ9BSG5 229 aaPredicted RBP11.17□□□□□ -0.62
LIMS3-203ENST00000480744 TMEM222Q9H0R3 208 aa11.17□□□□□ -0.62
LIMS3-203ENST00000480744 HEYLQ9NQ87 328 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms