RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 CHODLQ9H9P2 273 aa13.82□□□□□ -0.2
PKD1-213ENST00000480227 WASHC3Q9Y3C0 194 aa13.82□□□□□ -0.2
PKD1-213ENST00000480227 GRNP28799 593 aaKnown RBP13.81□□□□□ -0.2
PKD1-213ENST00000480227 VSTM2AQ8TAG5 236 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 ZNF596Q8TC21 504 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 NPIPB3Q92617 1050 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 RNASE7Q9H1E1 156 aaKnown RBP13.81□□□□□ -0.2
PKD1-213ENST00000480227 SVEP1Q4LDE5 3571 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 A0A1W2PN81 502 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 DDTP30046 118 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 GPX4P36969 197 aaPredicted RBP13.81□□□□□ -0.2
PKD1-213ENST00000480227 MMD2Q8IY49 270 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 LINC00311Q8N616 119 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 C19orf24Q9BVV8 132 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 KAAG1Q9UBP8 84 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 LY96Q9Y6Y9 160 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 COL6A6A6NMZ7 2263 aa13.81□□□□□ -0.2
PKD1-213ENST00000480227 HRNRQ86YZ3 2850 aaPredicted RBP13.81□□□□□ -0.2
PKD1-213ENST00000480227 SPTBN4Q9H254 2564 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 SPINK4O60575 86 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 SNRPCP09234 159 aaKnown RBP13.8□□□□□ -0.2
PKD1-213ENST00000480227 APOBEC3AP31941 199 aaPredicted RBP13.8□□□□□ -0.2
PKD1-213ENST00000480227 YPEL3P61236 119 aaPredicted RBP13.8□□□□□ -0.2
PKD1-213ENST00000480227 RBPJQ06330 500 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 RPEL1Q2QD12 228 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 SSX8Q7RTT4 187 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 C14orf144Q96I85 54 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 SLC25A2Q9BXI2 301 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 DNAJC4Q9NNZ3 241 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 ARL2-SNX15V9GYD0 113 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 V9GYV3 84 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 UBE2L3P68036 154 aaKnown RBP13.8□□□□□ -0.2
PKD1-213ENST00000480227 FXYD3Q14802 87 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 OR8I2Q8N0Y5 310 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 PNKDQ8N490 385 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 OR5AU1Q8NGC0 362 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 VKORC1Q9BQB6 163 aa13.8□□□□□ -0.2
PKD1-213ENST00000480227 MRPL36Q9P0J6 103 aaKnown RBP13.8□□□□□ -0.2
PKD1-213ENST00000480227 A0A087X0M5 115 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 A0A1B0GX30 115 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 PSMB11A5LHX3 300 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 FAM90A27PA6NNH2 459 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 GATCO43716 136 aaKnown RBP13.79□□□□□ -0.2
PKD1-213ENST00000480227 GCGP01275 180 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 CD3EP07766 207 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 APELAP0DMC3 54 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 IER3P46695 156 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 LGALS4P56470 323 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 TIGITQ495A1 244 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 OR1L6Q8NGR2 347 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 OR4A5Q8NH83 315 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 FAM167A-AS1Q96KT0 104 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 ASH1LQ9NR48 2969 aaKnown RBP13.79□□□□□ -0.2
PKD1-213ENST00000480227 A0A1W2PPI3 338 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 COX7A2P2O60397 106 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 PYYP10082 97 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 MRGPRG-AS1Q2M3A8 158 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 RUSC1-AS1Q66K80 236 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 FAM71F2Q6NXP2 309 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 C19orf35Q6ZS72 473 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 ZNF664Q8N3J9 261 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 C8orf31Q8N9H6 132 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 MRPL18Q9H0U6 180 aaKnown RBP13.79□□□□□ -0.2
PKD1-213ENST00000480227 TMEM133Q9H2Q1 129 aa13.79□□□□□ -0.2
PKD1-213ENST00000480227 FCN1O00602 326 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 MGST1P10620 155 aaKnown RBP13.78□□□□□ -0.2
PKD1-213ENST00000480227 CNTFRP26992 372 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 ZNF137PP52743 207 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 SLC35B1P78383 322 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 VMA21Q3ZAQ7 101 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 ASPHD1Q5U4P2 390 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 NHLRC2Q8NBF2 726 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 LINC00479Q96M42 142 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 ZNF355PQ9NSJ1 428 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 SPTBN1Q01082 2364 aaKnown RBP13.78□□□□□ -0.2
PKD1-213ENST00000480227 A0A1W2PRE2 83 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 SUB1P53999 127 aaKnown RBP eCLIP13.78□□□□□ -0.25e-6■■■■■ 28.3
PKD1-213ENST00000480227 TCL1AP56279 114 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 C10orf113Q5VZT2 155 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 HCP5Q6MZN7 132 aa13.78□□□□□ -0.2
PKD1-213ENST00000480227 MRPL32Q9BYC8 188 aaKnown RBP13.78□□□□□ -0.2
PKD1-213ENST00000480227 B9A039 149 aa13.77□□□□□ -0.21
PKD1-213ENST00000480227 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
PKD1-213ENST00000480227 SIAH2O43255 324 aa13.77□□□□□ -0.21
PKD1-213ENST00000480227 LURAP1LQ8IV03 231 aa13.77□□□□□ -0.21
PKD1-213ENST00000480227 IGKV1D-37A0A075B6S9 117 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 SNURFLB1AK76 121 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 PPOXP50336 477 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 PATE2Q6UY27 113 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 LHFPL4Q7Z7J7 247 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 TRAV9-1A0A075B6T8 112 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 MC5RP33032 325 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 NHLH1Q02575 133 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 ST6GALNAC3Q8NDV1 305 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 MISP3Q96FF7 219 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 SERTAD4Q9NUC0 356 aa13.76□□□□□ -0.21
PKD1-213ENST00000480227 IGHV2-26A0A0B4J1V2 119 aa13.75□□□□□ -0.21
PKD1-213ENST00000480227 TCRBV4S1A1TA0A5B7 111 aa13.75□□□□□ -0.21
PKD1-213ENST00000480227 SCGB1D1O95968 90 aa13.75□□□□□ -0.21
PKD1-213ENST00000480227 IGLV2-8P01709 118 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms