RNA–Protein interactions for RNA: ENST00000479620.1

GRIK3-204, Transcript of glutamate ionotropic receptor kainate type subunit 3, human

TSL 3

Gene GRIK3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRIK3-204	ENST00000479620	TMEM170A	Q8WVE7	144 aa		12.87	□□□□□ -0.35
GRIK3-204	ENST00000479620	TMEM190	Q8WZ59	177 aa		12.87	□□□□□ -0.35
GRIK3-204	ENST00000479620	MARC2	Q969Z3	335 aa		12.87	□□□□□ -0.35
GRIK3-204	ENST00000479620	ZNF414	Q96IQ9	312 aa		12.87	□□□□□ -0.35
GRIK3-204	ENST00000479620	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.87	□□□□□ -0.35
GRIK3-204	ENST00000479620	TECR	Q9NZ01	308 aa	Known RBP	12.87	□□□□□ -0.35
GRIK3-204	ENST00000479620	UFC1	Q9Y3C8	167 aa		12.87	□□□□□ -0.35
GRIK3-204	ENST00000479620	COL7A1	Q02388	2944 aa		12.87	□□□□□ -0.35
GRIK3-204	ENST00000479620	FAM240B	A0A1B0GVZ2	78 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	NUPL2	O15504	423 aa	Known RBP	12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	NXPH3	O95157	252 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	LY86	O95711	162 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	IGHV3-48	P01763	117 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	IFITM3	Q01628	133 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	REL	Q04864	619 aa	Predicted RBP	12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	DEFB114	Q30KQ6	69 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	DEFB121	Q5J5C9	76 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	LCN12	Q6JVE5	192 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	HAPLN4	Q86UW8	402 aa		12.86	□□□□□ -0.35
GRIK3-204	ENST00000479620	IGHV3-35	A0A0C4DH35	117 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	RPS10-NUDT3	A0A1W2PQS6	291 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620		K7EMT4	169 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	GNG7	O60262	68 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	ADAP1	O75689	374 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	TMEM50A	O95807	157 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	NPY1R	P25929	384 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	OPRK1	P41145	380 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	MLANA	Q16655	118 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	TM4SF20	Q53R12	229 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	OR4X1	Q8NH49	305 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	NUDT15	Q9NV35	164 aa		12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	MRPL27	Q9P0M9	148 aa	Known RBP	12.85	□□□□□ -0.35
GRIK3-204	ENST00000479620	TRAV6	A0A075B6T7	132 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	MED6	O75586	246 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	IFNA10	P01566	189 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	IFNA21	P01568	189 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	H2AFB2	P0C5Z0	115 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	SLC25A4	P12235	298 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	EDN2	P20800	178 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	CD300E	Q496F6	205 aa	Predicted RBP	12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	C11orf87	Q6NUJ2	197 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	UXS1	Q8NBZ7	420 aa		12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	DAZ1	Q9NQZ3	744 aa	Known RBP	12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	MRPL36	Q9P0J6	103 aa	Known RBP	12.84	□□□□□ -0.35
GRIK3-204	ENST00000479620	IZUMO1R	A6ND01	250 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	C15orf62	A8K5M9	175 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	CLN5	O75503	358 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	ID3	Q02535	119 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	ETFRF1	Q6IPR1	90 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	TMEM116	Q8NCL8	245 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	OR52B4	Q8NGK2	314 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	DYNLRB2	Q8TF09	96 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	CACNG8	Q8WXS5	425 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	OR10C1	Q96KK4	312 aa		12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	CIB3	Q96Q77	187 aa	Predicted RBP	12.83	□□□□□ -0.36
GRIK3-204	ENST00000479620	TRAV30	A0A087WSZ9	112 aa		12.82	□□□□□ -0.36
GRIK3-204	ENST00000479620	ZNF785	A8K8V0	405 aa		12.82	□□□□□ -0.36
GRIK3-204	ENST00000479620	SYNGR2	O43760	224 aa		12.82	□□□□□ -0.36
GRIK3-204	ENST00000479620	PRSS54	Q6PEW0	395 aa		12.82	□□□□□ -0.36
GRIK3-204	ENST00000479620		Q8N1Y9	231 aa		12.82	□□□□□ -0.36
GRIK3-204	ENST00000479620	ZNF431	Q8TF32	576 aa	Predicted RBP	12.82	□□□□□ -0.36
GRIK3-204	ENST00000479620	MLX	Q9UH92	298 aa		12.82	□□□□□ -0.36
GRIK3-204	ENST00000479620	SMAD5-AS1	Q9Y6J3	95 aa		12.82	□□□□□ -0.36
GRIK3-204	ENST00000479620	MPTX1	A8MV57	137 aa		12.81	□□□□□ -0.36
GRIK3-204	ENST00000479620	CD69	Q07108	199 aa		12.81	□□□□□ -0.36
GRIK3-204	ENST00000479620	ZNF600	Q6ZNG1	722 aa		12.81	□□□□□ -0.36
GRIK3-204	ENST00000479620	OR4D5	Q8NGN0	318 aa		12.81	□□□□□ -0.36
GRIK3-204	ENST00000479620	B9D2	Q9BPU9	175 aa		12.81	□□□□□ -0.36
GRIK3-204	ENST00000479620	C20orf24	Q9BUV8	137 aa		12.81	□□□□□ -0.36
GRIK3-204	ENST00000479620	TRAV25	A0A0B4J276	109 aa		12.8	□□□□□ -0.36
GRIK3-204	ENST00000479620	SCGB2A1	O75556	95 aa		12.8	□□□□□ -0.36
GRIK3-204	ENST00000479620	IL5	P05113	134 aa		12.8	□□□□□ -0.36
GRIK3-204	ENST00000479620	GPX4	P36969	197 aa	Predicted RBP	12.8	□□□□□ -0.36
GRIK3-204	ENST00000479620	TOMM20L	Q6UXN7	152 aa		12.8	□□□□□ -0.36
GRIK3-204	ENST00000479620	ENKUR	Q8TC29	256 aa		12.8	□□□□□ -0.36
GRIK3-204	ENST00000479620	MAGT1	Q9H0U3	335 aa		12.8	□□□□□ -0.36
GRIK3-204	ENST00000479620	YIF1A	O95070	293 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	IGKV1-17	P01599	117 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	IFNA4	P05014	189 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	IAPP	P10997	89 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	NKX2-1	P43699	371 aa	Predicted RBP	12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	RND2	P52198	227 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	RPP30	P78346	268 aa	Known RBP	12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	BTNL8	Q6UX41	500 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	NRARP	Q7Z6K4	114 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	TMEM61	Q8N0U2	210 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	C12orf45	Q8N5I9	185 aa	Predicted RBP	12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	SEC22C	Q9BRL7	303 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	ZFAND3	Q9H8U3	227 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620	SMPX	Q9UHP9	88 aa		12.79	□□□□□ -0.36
GRIK3-204	ENST00000479620		A8MZ25	164 aa		12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	WRB	O00258	174 aa		12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	IGLC1	P0CG04	106 aa		12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	DEFA1	P59665	94 aa		12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	DEFA3	P59666	94 aa		12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	RAB11A	P62491	216 aa		12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	IAH1	Q2TAA2	248 aa	Predicted RBP	12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	SLC16A13	Q7RTY0	426 aa		12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.78	□□□□□ -0.36
GRIK3-204	ENST00000479620	OR1S2	Q8NGQ3	325 aa		12.78	□□□□□ -0.36

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