RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 MGAT4CQ9UBM8 478 aa6.84□□□□□ -1.31
DDX56-211ENST00000479602 CSMD3Q7Z407 3707 aa6.84□□□□□ -1.31
DDX56-211ENST00000479602 BIRC6Q9NR09 4857 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 E5RGE8 158 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 WRBO00258 174 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 TMEM50AO95807 157 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 HOXD3P31249 432 aaPredicted RBP6.83□□□□□ -1.32
DDX56-211ENST00000479602 P2RY1P47900 373 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 NPBWR1P48145 328 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 INSL3P51460 131 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 FGL1Q08830 312 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 ZNF616Q08AN1 781 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 VWC2Q2TAL6 325 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 PRSS54Q6PEW0 395 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 SCARB1Q8WTV0 552 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 PPP1R1CQ8WVI7 109 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 LYSTQ99698 3801 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 MCRIP2Q9BUT9 160 aaKnown RBP6.83□□□□□ -1.32
DDX56-211ENST00000479602 GPR61Q9BZJ8 451 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 ZNF436Q9C0F3 470 aaPredicted RBP6.83□□□□□ -1.32
DDX56-211ENST00000479602 MED28Q9H204 178 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 GNB4Q9HAV0 340 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 C21orf62Q9NYP8 219 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 PEF1Q9UBV8 284 aaKnown RBP6.83□□□□□ -1.32
DDX56-211ENST00000479602 FBXL7Q9UJT9 491 aa6.83□□□□□ -1.32
DDX56-211ENST00000479602 STRAPQ9Y3F4 350 aaKnown RBP6.83□□□□□ -1.32
DDX56-211ENST00000479602 STARD9Q9P2P6 4700 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 C5orf51A6NDU8 294 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 LINC01619G3V211 115 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 GOSR2O14653 212 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 TGOLN2O43493 480 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 CLN5O75503 358 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 OR2J3O76001 311 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 NDUFB8O95169 186 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 MPC2O95563 127 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 CFDP00746 253 aaPredicted RBP6.82□□□□□ -1.32
DDX56-211ENST00000479602 PF4P02776 101 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 MFAP4P55083 255 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 YPEL3P61236 119 aaPredicted RBP6.82□□□□□ -1.32
DDX56-211ENST00000479602 POLR2GP62487 172 aaKnown RBP eCLIP6.82□□□□□ -1.32
DDX56-211ENST00000479602 DLK1P80370 383 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 KLF5Q13887 457 aaPredicted RBP6.82□□□□□ -1.32
DDX56-211ENST00000479602 DEFB121Q5J5C9 76 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 THAP8Q8NA92 274 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 KLHL30-AS1Q8NEE0 82 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 OR11H7Q8NGC8 314 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 DCUN1D4Q92564 292 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 PINX1Q96BK5 328 aaKnown RBP6.82□□□□□ -1.32
DDX56-211ENST00000479602 RAX2Q96IS3 184 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 WWC2-AS2Q96NR7 200 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 HINT2Q9BX68 163 aa6.82□□□□□ -1.32
DDX56-211ENST00000479602 FNDC4Q9H6D8 234 aaPredicted RBP6.82□□□□□ -1.32
DDX56-211ENST00000479602 MFSD2BA6NFX1 497 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 K7EMT4 169 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 CCL24O00175 119 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 BMPR1BO00238 502 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 NDUFA4O00483 81 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 CCSO14618 274 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 GGCTO75223 188 aaKnown RBP6.81□□□□□ -1.32
DDX56-211ENST00000479602 MT-CO2P00403 227 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 IFNA10P01566 189 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 RLN2P04090 185 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 NHLRC4P0CG21 123 aaPredicted RBP6.81□□□□□ -1.32
DDX56-211ENST00000479602 CXCL3P19876 107 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 SULT1A1P50225 295 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 RELQ04864 619 aaPredicted RBP6.81□□□□□ -1.32
DDX56-211ENST00000479602 RAB32Q13637 225 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 ATP6V1FQ16864 119 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 SLC25A24Q6NUK1 477 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 C8orf86Q6ZUL3 223 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 SLC16A13Q7RTY0 426 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 OR1S2Q8NGQ3 325 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 MARC2Q969Z3 335 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 OR4C12Q96R67 309 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 PARD6GQ9BYG4 376 aaPredicted RBP6.81□□□□□ -1.32
DDX56-211ENST00000479602 SLC45A2Q9UMX9 530 aa6.81□□□□□ -1.32
DDX56-211ENST00000479602 SSSCA1O60232 199 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 MPDU1O75352 247 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 OR2C1O95371 312 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 REG1AP05451 166 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 CTSGP08311 255 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 IGLC1P0CG04 106 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 C8orf88P0DMB2 117 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 S100A11P31949 105 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 ADMP35318 185 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 OPRK1P41145 380 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 HBG1P69891 147 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 HBG2P69892 147 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 FCN2Q15485 313 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 TMEM144Q7Z5S9 345 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 STX12Q86Y82 276 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 TMEM252Q8N6L7 170 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 OR11H1Q8NG94 326 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 OR1N2Q8NGR9 330 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 TMEM190Q8WZ59 177 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 PPP1R14BQ96C90 147 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 ZNF414Q96IQ9 312 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 AQP10Q96PS8 301 aa6.8□□□□□ -1.32
DDX56-211ENST00000479602 TRGV9Q99603 122 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms