RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 IGKV1-5P01602 117 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 ZNF688P0C7X2 276 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 SPP1P10451 314 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 P2RY1P47900 373 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 PPP5CP53041 499 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 RND3P61587 244 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 TMEM41BQ5BJD5 291 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 RNASE10Q5GAN6 216 aaKnown RBP9.65□□□□□ -0.86
VCL-205ENST00000478896 MORN3Q6PF18 240 aaPredicted RBP9.65□□□□□ -0.86
VCL-205ENST00000478896 TP53RKQ96S44 253 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 HRH4Q9H3N8 390 aa9.65□□□□□ -0.86
VCL-205ENST00000478896 C3orf85A0A1B0GTC6 90 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 INS-IGF2F8WCM5 200 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 HPGDSO60760 199 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 CLN5O75503 358 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 RNASE2P10153 161 aaKnown RBP9.64□□□□□ -0.87
VCL-205ENST00000478896 MIFP14174 115 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 ETV6P41212 452 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 EIF2B2P49770 351 aaKnown RBP9.64□□□□□ -0.87
VCL-205ENST00000478896 NCS1P62166 190 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 TRPT1Q86TN4 253 aaKnown RBP9.64□□□□□ -0.87
VCL-205ENST00000478896 RRNAD1Q96FB5 475 aaKnown RBP9.64□□□□□ -0.87
VCL-205ENST00000478896 GRAMD2BQ96HH9 432 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 COPZ2Q9P299 210 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 APLNQ9ULZ1 77 aa9.64□□□□□ -0.87
VCL-205ENST00000478896 AGRNO00468 2067 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 A0A087WXM4 84 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 A0A0B4J293 547 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 KNCNA6PVL3 124 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 K7EQG2 157 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 ELK1P19419 428 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 C4BPBP20851 252 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 VBP1P61758 197 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 ACTL10Q5JWF8 245 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 CCDC71LQ8N9Z2 235 aa9.63□□□□□ -0.87
VCL-205ENST00000478896 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
VCL-205ENST00000478896 MRPL36Q9P0J6 103 aaKnown RBP9.63□□□□□ -0.87
VCL-205ENST00000478896 TRAV10A0A0B4J240 114 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 RPS10-NUDT3A0A1W2PQS6 291 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 RBMY1A1P0DJD3 496 aaKnown RBP9.62□□□□□ -0.87
VCL-205ENST00000478896 RBMY1CP0DJD4 496 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 CRYBB3P26998 211 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 RBMY1FQ15415 496 aaKnown RBP9.62□□□□□ -0.87
VCL-205ENST00000478896 SP6Q3SY56 376 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 TIGITQ495A1 244 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 SCGB2B2Q4G0G5 96 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 Q6ZTC4 211 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 ARRDC1Q8N5I2 433 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 OR4X1Q8NH49 305 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 CLEC5AQ9NY25 188 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 KLK11Q9UBX7 282 aa9.62□□□□□ -0.87
VCL-205ENST00000478896 IGHV4-4A0A075B6R2 117 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 TRAV30A0A087WSZ9 112 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 ZNF705EA8MWA4 302 aaPredicted RBP9.61□□□□□ -0.87
VCL-205ENST00000478896 TNFAIP8O95379 198 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 CD3DP04234 171 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 P0C879 139 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 DHRS2Q13268 280 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 MLANAQ16655 118 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 PSMG4Q5JS54 123 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 MZT2AQ6P582 158 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 ZFAND1Q8TCF1 268 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 DCANP1Q8TF63 244 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 FUNDC2Q9BWH2 189 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 TBC1D24Q9ULP9 559 aa9.61□□□□□ -0.87
VCL-205ENST00000478896 ELOA3CA0A087WX78 387 aaPredicted RBP9.6□□□□□ -0.87
VCL-205ENST00000478896 A0A0G2JRQ6 117 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 HELTA6NFD8 242 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 HNRNPCP07910 306 aaKnown RBP eCLIP9.6□□□□□ -0.87
VCL-205ENST00000478896 GIG44P09565 113 aaPredicted RBP9.6□□□□□ -0.87
VCL-205ENST00000478896 TBPP20226 339 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 UCP1P25874 307 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 RPL5P46777 297 aaKnown RBP9.6□□□□□ -0.87
VCL-205ENST00000478896 RORCP51449 518 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 OR1S2Q8NGQ3 325 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 AP3S1Q92572 193 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 EXTL2Q9UBQ6 330 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 X6R8D5 127 aa9.6□□□□□ -0.87
VCL-205ENST00000478896 B3GALNT1O75752 331 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 HTR2BP41595 481 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 RND2P52198 227 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 AP2S1P53680 142 aaPredicted RBP9.59□□□□□ -0.87
VCL-205ENST00000478896 SPCS3P61009 180 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 NUTF2P61970 127 aaKnown RBP9.59□□□□□ -0.87
VCL-205ENST00000478896 FAM219AQ8IW50 185 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 OR13C8Q8NGS7 320 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 OR52I2Q8NH67 350 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 Q8WTZ3 238 aa9.59□□□□□ -0.87
VCL-205ENST00000478896 C14orf166Q9Y224 244 aaKnown RBP9.59□□□□□ -0.87
VCL-205ENST00000478896 OR5AC1P0C628 307 aa9.58□□□□□ -0.88
VCL-205ENST00000478896 IGLC1P0CG04 106 aa9.58□□□□□ -0.88
VCL-205ENST00000478896 SLC25A4P12235 298 aa9.58□□□□□ -0.88
VCL-205ENST00000478896 OR10J1P30954 320 aa9.58□□□□□ -0.88
VCL-205ENST00000478896 TAS2R19P59542 299 aa9.58□□□□□ -0.88
VCL-205ENST00000478896 SNRPD3P62318 126 aaKnown RBP9.58□□□□□ -0.88
VCL-205ENST00000478896 BSXQ3C1V8 233 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms