RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 IGHV3OR16-13A0A075B7E8 117 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 IGHV3-74A0A0B4J1X5 117 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 GABARAPH6UMI1 98 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 RGS5O15539 181 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 CLN5O75503 358 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 CA1P00915 261 aaPredicted RBP10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 IGHV3-48P01763 117 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 CD74P04233 296 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 IFNA4P05014 189 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 UCP1P25874 307 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 HTR2BP41595 481 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 RPL5P46777 297 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 STEAP1BQ6NZ63 245 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 STHQ8IWL8 128 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 OR13C8Q8NGS7 320 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 ST8SIA2Q92186 375 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 ABHD1Q96SE0 405 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 MS4A6AQ9H2W1 248 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 RABAC1Q9UI14 185 aa10.65□□□□□ -0.7
SMARCE1-209ENST00000478349 LYSTQ99698 3801 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 A0A0B4J293 547 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 TEX13DA0A0J9YY54 714 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 DISC1C4P0D8 188 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 TMEM50AO95807 157 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 P0C879 139 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 RNASE2P10153 161 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 SPCS3P61009 180 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 DHODHQ02127 395 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 TMEM187Q14656 261 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 IZUMO4Q1ZYL8 232 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 NOXA1Q86UR1 476 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 OR4X1Q8NH49 305 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 OR52E5Q8NH55 327 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 C11orf45Q8TAV5 145 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 PHLDA1Q8WV24 401 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 TMEM230Q96A57 120 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1-209ENST00000478349 PIGBOS1A0A0B4J2F0 54 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 HELTA6NFD8 242 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 SLC25A4P12235 298 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 ETV6P41212 452 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 DEFB131AP59861 70 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 RBMS2Q15434 407 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 CTF1Q16619 201 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 GPR107Q5VW38 600 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 PVRIGQ6DKI7 326 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 ETFRF1Q6IPR1 90 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 OR11H2Q8NH07 326 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 RBPMSQ93062 196 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 TMEM222Q9H0R3 208 aa10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 HEYLQ9NQ87 328 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-209ENST00000478349 SPP1P10451 314 aa10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 AP2S1P53680 142 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 TCTAP57738 103 aa10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 SP6Q3SY56 376 aa10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 MORN3Q6PF18 240 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 STXBP6Q8NFX7 210 aa10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 MARCH1Q8TCQ1 289 aa10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 RNASEH2CQ8TDP1 164 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 PRRT1Q99946 306 aa10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 DNAH1Q9P2D7 4330 aa10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 SACSQ9NZJ4 4579 aa10.62□□□□□ -0.71
SMARCE1-209ENST00000478349 GSTZ1O43708 216 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 CDS2O95674 445 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 OR5AC1P0C628 307 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 CRYBB3P26998 211 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 NUP62P37198 522 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 P2RY1P47900 373 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 EWSR1Q01844 656 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 GPR141Q7Z602 305 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 OR1S2Q8NGQ3 325 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 Q8WTZ3 238 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 SMIM4Q8WVI0 70 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 SCGB3A2Q96PL1 93 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 NAA60Q9H7X0 242 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 PFDN2Q9UHV9 154 aa10.61□□□□□ -0.71
SMARCE1-209ENST00000478349 IGHV3-66A0A0C4DH42 116 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 A0A1B0GU03 582 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 CEBPZOSA8MTT3 80 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 AKAIN1P0CW23 69 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 ZNF124Q15973 351 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 BSXQ3C1V8 233 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 C2orf83Q53S99 150 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 LEMD1Q68G75 181 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 OR4D10Q8NGI6 311 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 MRPS26Q9BYN8 205 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 FBXL17Q9UF56 701 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 KCNIP3Q9Y2W7 256 aa10.6□□□□□ -0.71
SMARCE1-209ENST00000478349 C11orf94C9JXX5 98 aa10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 NOL3O60936 208 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-209ENST00000478349 IL18Q14116 193 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms