RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ANKRD55Q3KP44 614 aa17.09■□□□□ 0.33
TRAF4-211ENST00000478021 CENPSQ8N2Z9 138 aa17.09■□□□□ 0.33
TRAF4-211ENST00000478021 MRPL36Q9P0J6 103 aaKnown RBP17.09■□□□□ 0.33
TRAF4-211ENST00000478021 IL7P13232 177 aa17.08■□□□□ 0.32
TRAF4-211ENST00000478021 HTR2BP41595 481 aa17.08■□□□□ 0.32
TRAF4-211ENST00000478021 NAP1L6A6NFF2 107 aa17.07■□□□□ 0.32
TRAF4-211ENST00000478021 SFT2D2O95562 160 aa17.07■□□□□ 0.32
TRAF4-211ENST00000478021 RBPMS2Q6ZRY4 209 aaKnown RBP17.07■□□□□ 0.32
TRAF4-211ENST00000478021 DEFB125Q8N687 156 aa17.07■□□□□ 0.32
TRAF4-211ENST00000478021 SLC24A4Q8NFF2 622 aa17.07■□□□□ 0.32
TRAF4-211ENST00000478021 IGHV3-49A0A0A0MS15 119 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 C15orf62A8K5M9 175 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 K7EMT4 169 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 TMEM50AO95807 157 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 TNFRSF9Q07011 255 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 OR52B4Q8NGK2 314 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 OR1S1Q8NH92 325 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 RCHY1Q96PM5 261 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 RBKSQ9H477 322 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 FLVCR2Q9UPI3 526 aa17.06■□□□□ 0.32
TRAF4-211ENST00000478021 OR11H12B2RN74 326 aa17.05■□□□□ 0.32
TRAF4-211ENST00000478021 NDUFB6O95139 128 aa17.05■□□□□ 0.32
TRAF4-211ENST00000478021 C2orf83Q53S99 150 aa17.05■□□□□ 0.32
TRAF4-211ENST00000478021 TMEM170AQ8WVE7 144 aa17.05■□□□□ 0.32
TRAF4-211ENST00000478021 WWC2-AS2Q96NR7 200 aa17.05■□□□□ 0.32
TRAF4-211ENST00000478021 HIPK2Q9H2X6 1198 aa17.05■□□□□ 0.32
TRAF4-211ENST00000478021 HSPB7Q9UBY9 170 aa17.05■□□□□ 0.32
TRAF4-211ENST00000478021 IGHV3OR16-13A0A075B7E8 117 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 IGHV3-74A0A0B4J1X5 117 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 TRAV25A0A0B4J276 109 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 A0A1B0GU03 582 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 DUXBA0A1W2PPF3 345 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 NPY1RP25929 384 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 BTCP35070 178 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 TOMM20LQ6UXN7 152 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 SLC16A13Q7RTY0 426 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 LRTM2Q8N967 370 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 DTD1Q8TEA8 209 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 OR10C1Q96KK4 312 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 ZMAT4Q9H898 229 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 SRD5A3Q9H8P0 318 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 SMPXQ9UHP9 88 aa17.04■□□□□ 0.32
TRAF4-211ENST00000478021 IGHV7-4-1A0A0J9YVY3 117 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 RPS10-NUDT3A0A1W2PQS6 291 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 CENPXA8MT69 81 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 CLN5O75503 358 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 HAGHQ16775 308 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 ZNF600Q6ZNG1 722 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 TMEM116Q8NCL8 245 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 OR4X1Q8NH49 305 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 TM2D3Q9BRN9 247 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 CACFD1Q9UGQ2 172 aa17.03■□□□□ 0.32
TRAF4-211ENST00000478021 PUS1Q9Y606 427 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAF4-211ENST00000478021 PIGBOS1A0A0B4J2F0 54 aa17.02■□□□□ 0.32
TRAF4-211ENST00000478021 CHEK1O14757 476 aa17.02■□□□□ 0.32
TRAF4-211ENST00000478021 IFNA10P01566 189 aa17.02■□□□□ 0.32
TRAF4-211ENST00000478021 HOXB5P09067 269 aa17.02■□□□□ 0.32
TRAF4-211ENST00000478021 RNF2Q99496 336 aa17.02■□□□□ 0.32
TRAF4-211ENST00000478021 RHPN1-AS1Q9BWJ2 59 aa17.02■□□□□ 0.32
TRAF4-211ENST00000478021 TRAV14DV4A0A0A6YYC5 116 aa17.01■□□□□ 0.31
TRAF4-211ENST00000478021 C9orf170A2RU37 121 aa17.01■□□□□ 0.31
TRAF4-211ENST00000478021 TSPAN4O14817 238 aa17.01■□□□□ 0.31
TRAF4-211ENST00000478021 TIGITQ495A1 244 aa17.01■□□□□ 0.31
TRAF4-211ENST00000478021 LAMTOR1Q6IAA8 161 aa17.01■□□□□ 0.31
TRAF4-211ENST00000478021 RNASEH2CQ8TDP1 164 aaKnown RBP17.01■□□□□ 0.31
TRAF4-211ENST00000478021 SPAG8Q99932 426 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-211ENST00000478021 C7orf50Q9BRJ6 194 aaKnown RBP17.01■□□□□ 0.31
TRAF4-211ENST00000478021 GINS3Q9BRX5 216 aa17.01■□□□□ 0.31
TRAF4-211ENST00000478021 ZFAND3Q9H8U3 227 aa17.01■□□□□ 0.31
TRAF4-211ENST00000478021 RBMY1BA6NDE4 496 aaKnown RBP17■□□□□ 0.31
TRAF4-211ENST00000478021 RBMY1EA6NEQ0 496 aaKnown RBP17■□□□□ 0.31
TRAF4-211ENST00000478021 PITX3O75364 302 aa17■□□□□ 0.31
TRAF4-211ENST00000478021 RBMY1DP0C7P1 496 aaKnown RBP17■□□□□ 0.31
TRAF4-211ENST00000478021 IAPPP10997 89 aa17■□□□□ 0.31
TRAF4-211ENST00000478021 RND2P52198 227 aa17■□□□□ 0.31
TRAF4-211ENST00000478021 UBE2MP61081 183 aaKnown RBP17■□□□□ 0.31
TRAF4-211ENST00000478021 PRSS54Q6PEW0 395 aa17■□□□□ 0.31
TRAF4-211ENST00000478021 UBQLN2Q9UHD9 624 aa17■□□□□ 0.31
TRAF4-211ENST00000478021 PLA2G10O15496 165 aa16.99■□□□□ 0.31
TRAF4-211ENST00000478021 ANXA7P20073 488 aaKnown RBP16.99■□□□□ 0.31
TRAF4-211ENST00000478021 GGNBP1Q5YKI7 109 aa16.99■□□□□ 0.31
TRAF4-211ENST00000478021 LINC00322Q6ZN03 302 aaPredicted RBP16.99■□□□□ 0.31
TRAF4-211ENST00000478021 TMED3Q9Y3Q3 217 aa16.99■□□□□ 0.31
TRAF4-211ENST00000478021 U3KQ87 197 aa16.99■□□□□ 0.31
TRAF4-211ENST00000478021 HUWE1Q7Z6Z7 4374 aaKnown RBP16.99■□□□□ 0.31
TRAF4-211ENST00000478021 IGKV3-7A0A075B6H7 116 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 IGHV3-66A0A0C4DH42 116 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 SCGB2A1O75556 95 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 ADAP1O75689 374 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 IGKV1-17P01599 117 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 APOHP02749 345 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-211ENST00000478021 OR4E1P0C645 316 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 SLC25A4P12235 298 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 CNPY1Q3B7I2 92 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 NOXA1Q86UR1 476 aa16.98■□□□□ 0.31
TRAF4-211ENST00000478021 LYRM1O43325 122 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 IGLC1P0CG04 106 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 SLC25A6P12236 298 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 DHRS2Q13268 280 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 LYG2Q86SG7 212 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms