RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 XGP55808 180 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 ARL16Q0P5N6 197 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 OR8B8Q15620 311 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 DMRTC1Q5HYR2 192 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 LINC00696Q6ZRV3 163 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 SPACA3Q8IXA5 215 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 GJC3Q8NFK1 279 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 SPACA5Q96QH8 159 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 PBOV1Q9GZY1 135 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 OSTCQ9NRP0 149 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 OR1A1Q9P1Q5 309 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 KLF13Q9Y2Y9 288 aaPredicted RBP10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 PINLYPA6NC86 204 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 TMEM8BA6NDV4 472 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 K7EN84 100 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 CXCL13O43927 109 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 OR2J3O76001 311 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 OR7C1O76099 320 aaPredicted RBP10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 CRYAAP02489 173 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 SRD5A1P18405 259 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 NTF4P34130 210 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 FOXI1Q12951 378 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 DTX1Q86Y01 620 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 C8orf46Q8TAG6 207 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 CYYR1Q96J86 154 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 ZNF331Q9NQX6 463 aaPredicted RBP10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 PSENENQ9NZ42 101 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 HILPDAQ9Y5L2 63 aa10.44□□□□□ -0.74
RTFDC1-207ENST00000477573 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 A1L4Q6 167 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 SYNGR2O43760 224 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 LINC01545Q5VT33 79 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 FOXL2NBQ6ZUU3 175 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 C6orf201Q7Z4U5 140 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 TBC1D26Q86UD7 250 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 SLC25A33Q9BSK2 321 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 TECRQ9NZ01 308 aaKnown RBP10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 CXorf1O96002 111 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 PRTN3P24158 256 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 PLGLB1Q02325 96 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 SRSF1Q07955 248 aaKnown RBP eCLIP10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 TIGITQ495A1 244 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 RNF144BQ7Z419 303 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 OSR1Q8TAX0 266 aaPredicted RBP10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 ARPC1AQ92747 370 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 RDH5Q92781 318 aa10.43□□□□□ -0.74
RTFDC1-207ENST00000477573 A0A1W2PRE2 83 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 SMIM27A0A1W2PRY6 76 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 CEACAM4O75871 244 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 SP1P08047 785 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 SLC38A11Q08AI6 406 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 GAGE13Q4V321 117 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 TMEM78Q5T7P6 136 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 TEX45Q8NA69 505 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 C11orf52Q96A22 123 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 TTTY12Q9BZ98 90 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 IZUMO1RA6ND01 250 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 SMIM9A6NGZ8 99 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 APOMO95445 188 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 PPYP01298 95 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 G6PCP35575 357 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 TCF15Q12870 199 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 AAED1Q7RTV5 226 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 LRRC29Q8WV35 223 aa10.42□□□□□ -0.74
RTFDC1-207ENST00000477573 FAM90A26D6RGX4 464 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 RHODO00212 210 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 ZNF121P58317 390 aaPredicted RBP10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 CR1LQ2VPA4 569 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 DNAJC30Q96LL9 226 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 HDHD3Q9BSH5 251 aaPredicted RBP10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 MAP1LC3AQ9H492 121 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 LIN7CQ9NUP9 197 aaKnown RBP10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 ARHGAP21Q5T5U3 1957 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 MED13Q9UHV7 2174 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 E9PLD3 99 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 FCN3O75636 299 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 NDUFV3P56181 108 aaKnown RBP10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 TAS2R45P59539 299 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 FAM27BQ5VT28 67 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 MDS2Q8NDY4 140 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 NABP1Q96AH0 204 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 Q96M66 194 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 TMEM147Q9BVK8 224 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 HES7Q9BYE0 225 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 PRO0461Q9UI25 63 aa10.41□□□□□ -0.74
RTFDC1-207ENST00000477573 SMAD7O15105 426 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 MAGEA5P43359 124 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 MEOX1P50221 254 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 TCTAP57738 103 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 KISS1Q15726 138 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 NHLRC2Q8NBF2 726 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 TMEM178AQ8NBL3 297 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 PPP1R35Q8TAP8 253 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 SPTSSAQ969W0 71 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.74
RTFDC1-207ENST00000477573 IGHV1-24A0A0C4DH33 117 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 FNDC10F2Z333 226 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 CCDC179H3BU77 68 aa10.39□□□□□ -0.75
RTFDC1-207ENST00000477573 INSL3P51460 131 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms