RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 RPL27AP46776 148 aaKnown RBP8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 TAS2R45P59539 299 aa8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 HCP5Q6MZN7 132 aa8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 MRPL41Q8IXM3 137 aaKnown RBP8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 TMEM37Q8WXS4 190 aa8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 ZNF503Q96F45 646 aa8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 SIGLEC9Q9Y336 463 aa8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 ARHGAP32A7KAX9 2087 aa8.85□□□□□ -0.99
HLA-DMB-260ENST00000477537 TENM4Q6N022 2769 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 LRRK2Q5S007 2527 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 TRBV20OR9-2A0A075B6H5 130 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 A0A1W2PPQ1 181 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 S100A9P06702 114 aaKnown RBP8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 APELAP0DMC3 54 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 AREGP15514 252 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 HOXA5P20719 270 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 HNF1AP20823 631 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 SRP14P37108 136 aaKnown RBP8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 ARF6P62330 175 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 PQLC2Q6ZP29 291 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 MISP3Q96FF7 219 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 SRD5A3Q9H8P0 318 aa8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 MRPL36Q9P0J6 103 aaKnown RBP8.84□□□□□ -0.99
HLA-DMB-260ENST00000477537 IGKV1D-37A0A075B6S9 117 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 TCRBV4S1A1TA0A5B7 111 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 LY6LH3BQJ8 138 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 PHOX2AO14813 284 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 COX7A2P2O60397 106 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 OR10J4P0C629 311 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 C8orf88P0DMB2 117 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 CD99P14209 185 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 COMPP49747 757 aaPredicted RBP8.84□□□□□ -1
HLA-DMB-260ENST00000477537 MFAP2P55001 183 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 CTAG1AP78358 180 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 ZNF90Q03938 601 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 THAP8Q8NA92 274 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 OR2T10Q8NGZ9 312 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 OCC1Q8TAD7 63 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 C11orf52Q96A22 123 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 RNF2Q99496 336 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 TCEAL7Q9BRU2 100 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 SLC25A33Q9BSK2 321 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 MRPL32Q9BYC8 188 aaKnown RBP8.84□□□□□ -1
HLA-DMB-260ENST00000477537 FBXL15Q9H469 300 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 DNAJC4Q9NNZ3 241 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 ARL2-SNX15V9GYD0 113 aa8.84□□□□□ -1
HLA-DMB-260ENST00000477537 LRBAP50851 2863 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 LOC105371242A0A075B767 164 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 TRAV5A0A0B4J249 113 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 MDFIC2A0A1B0GVS7 189 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 PSMB11A5LHX3 300 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 PPP1R2P9O14990 202 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 SMIM6P0DI80 62 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 TPTE2P1Q5T6R2 138 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 MORN5Q5VZ52 161 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 KCNIP4Q6PIL6 250 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 C19orf35Q6ZS72 473 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 PPP1R27Q86WC6 154 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 OR4X1Q8NH49 305 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 SFRP2Q96HF1 295 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 SSBP3Q9BWW4 388 aaPredicted RBP8.83□□□□□ -1
HLA-DMB-260ENST00000477537 SLC25A2Q9BXI2 301 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 CHODLQ9H9P2 273 aa8.83□□□□□ -1
HLA-DMB-260ENST00000477537 NBPF19A0A087WUL8 3843 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 HELZ2Q9BYK8 2649 aaKnown RBP8.82□□□□□ -1
HLA-DMB-260ENST00000477537 PPP5D1E7EU14 171 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 TIMM23O14925 209 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 GGCTO75223 188 aaKnown RBP8.82□□□□□ -1
HLA-DMB-260ENST00000477537 CDX1P47902 265 aaPredicted RBP8.82□□□□□ -1
HLA-DMB-260ENST00000477537 FAM3BP58499 235 aaPredicted RBP8.82□□□□□ -1
HLA-DMB-260ENST00000477537 LDLRAD2Q5SZI1 272 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 PVRIGQ6DKI7 326 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 ETFRF1Q6IPR1 90 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 DTX2Q86UW9 622 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 OR1L4Q8NGR5 311 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 FAM167A-AS1Q96KT0 104 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 A0A1W2PPR1 153 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 CRYBB3P26998 211 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 HTR1DP28221 377 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 KLRD1Q13241 179 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 PLGLAQ15195 96 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 C10orf113Q5VZT2 155 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 RUSC1-AS1Q66K80 236 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 PATE2Q6UY27 113 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 OR5AU1Q8NGC0 362 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 PFDN5Q99471 154 aa8.82□□□□□ -1
HLA-DMB-260ENST00000477537 HRNRQ86YZ3 2850 aaPredicted RBP8.81□□□□□ -1
HLA-DMB-260ENST00000477537 CRYBG3Q68DQ2 2970 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 IGHV3-21A0A0B4J1V1 117 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 IFITM10A6NMD0 228 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 TEX22C9J3V5 150 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 C9JCJ5 164 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 M0R1W7 72 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 FCN1O00602 326 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 MOSP00540 346 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 CRYGCP07315 174 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 CDKN1AP38936 164 aa8.81□□□□□ -1
HLA-DMB-260ENST00000477537 LGALS4P56470 323 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms