RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 OPRK1P41145 380 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 HOXA1P49639 335 aaPredicted RBP4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 EIF2B2P49770 351 aaKnown RBP4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 PPP5CP53041 499 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 FXYD7P58549 80 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 NUTF2P61970 127 aaKnown RBP4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 TSPAN5P62079 268 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 PRCDQ00LT1 54 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 DHRS2Q13268 280 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 LGALS9BQ3B8N2 356 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 MAPKAPK5-AS1Q8N8E1 139 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 MRGPRFQ96AM1 343 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 SLC25A38Q96DW6 304 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 GRAMD2BQ96HH9 432 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 C1QTNF4Q9BXJ3 329 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 FXYD6Q9H0Q3 95 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 ENY2Q9NPA8 101 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 XCL2Q9UBD3 114 aa4.81□□□□□ -1.64
RTFDC1-206ENST00000477485 A0A1B0GU03 582 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 C16orf90A8MZG2 172 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 SPART-AS1P0CW21 52 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 AKR1C2P52895 323 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 SUB1P53999 127 aaKnown RBP eCLIP4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 TAS2R46P59540 309 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 IZUMO4Q1ZYL8 232 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 TBC1D26Q86UD7 250 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 ZNF114Q8NC26 417 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 OR6F1Q8NGZ6 308 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 RNASE11Q8TAA1 199 aaKnown RBP4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 NRG4Q8WWG1 115 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 RAB40CQ96S21 281 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 RNF167Q9H6Y7 350 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 TMED3Q9Y3Q3 217 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 DNAH10Q8IVF4 4471 aa4.8□□□□□ -1.64
RTFDC1-206ENST00000477485 A0A0A6YYH2 397 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 A6NJ64 397 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 CORTO00230 105 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 TMEM50AO95807 157 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 HLA-DMAP28067 261 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 FGF9P31371 208 aaPredicted RBP4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 HRH1P35367 487 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 HSPA13P48723 471 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 HSPE1P61604 102 aaKnown RBP4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 SNRPD3P62318 126 aaKnown RBP4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 TIGITQ495A1 244 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 TMEM69Q5SWH9 247 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 C1orf134Q5TEV5 83 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 IZUMO2Q6UXV1 221 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 Q6ZRM9 215 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 CSNK1G2-AS1Q8NCQ2 148 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 S100A16Q96FQ6 103 aaKnown RBP4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 SEC22AQ96IW7 307 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 ATG101Q9BSB4 218 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 VCX3BQ9H321 246 aa4.79□□□□□ -1.64
RTFDC1-206ENST00000477485 CLN5O75503 358 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 HNRNPCP07910 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 PGAM2P15259 253 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 CRYBB3P26998 211 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 ETV6P41212 452 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 SCAND1P57086 179 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 TAS2R20P59543 309 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 GABARAPL2P60520 117 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 KCTD21Q4G0X4 260 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 UBE2NLQ5JXB2 153 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 LPCAT3Q6P1A2 487 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 DHRS11Q6UWP2 260 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 SAMD12Q8N8I0 201 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 DCANP1Q8TF63 244 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 LINC00052Q96N35 136 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 C7orf50Q9BRJ6 194 aaKnown RBP4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 NIPSNAP3BQ9BS92 247 aa4.78□□□□□ -1.64
RTFDC1-206ENST00000477485 TEX48A0A1B0GUV7 120 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 TMEM189A5PLL7 270 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 FAM90A26D6RGX4 464 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 EREGO14944 169 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 IGKV1-39P01597 117 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 CD74P04233 296 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 IGKV1D-39P04432 117 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 IL4P05112 153 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 RNASE2P10153 161 aaKnown RBP4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 PRSS3P35030 304 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 AP2S1P53680 142 aaPredicted RBP4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 MLANAQ16655 118 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 TRIM16LQ309B1 348 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 RNASE12Q5GAN4 147 aaKnown RBP4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 TMEM88Q6PEY1 159 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 SIGLEC15Q6ZMC9 328 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 Q6ZR54 194 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 SPARTQ8N0X7 666 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 OR4B1Q8NGF8 309 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 COQ8AQ8NI60 647 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 Q8WTZ3 238 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 FCGR1BQ92637 280 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 NRN1Q9NPD7 142 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 MRPL36Q9P0J6 103 aaKnown RBP4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 RFNGQ9Y644 331 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 PKHD1P08F94 4074 aa4.77□□□□□ -1.65
RTFDC1-206ENST00000477485 TRAV30A0A087WSZ9 112 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 LOC102723971A0A1B0GUV8 181 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms