RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 SCN3BQ9NY72 215 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 DAPK2Q9UIK4 370 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 VPS13BQ7Z7G8 4022 aa6.91□□□□□ -1.3
COL4A5-204ENST00000477429 CYB5BO43169 146 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 TMEM50AO95807 157 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 F2RP25116 425 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 P2RY1P47900 373 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 RFX2P48378 723 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 AQP4P55087 323 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 FXYD7P58549 80 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 CATR1Q13166 79 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 ARL6IP1Q15041 203 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 PSMG4Q5JS54 123 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 GDF5OSQ5U4N7 250 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 ZNF705AQ6ZN79 300 aaPredicted RBP6.9□□□□□ -1.3
COL4A5-204ENST00000477429 UBE2DNLQ8IWF7 75 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 TXN2Q99757 166 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 FXYD6Q9H0Q3 95 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 FNDC4Q9H6D8 234 aaPredicted RBP6.9□□□□□ -1.3
COL4A5-204ENST00000477429 RNF167Q9H6Y7 350 aa6.9□□□□□ -1.3
COL4A5-204ENST00000477429 NOTOA8MTQ0 251 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 ZNF705FA8MVS1 300 aaPredicted RBP6.89□□□□□ -1.31
COL4A5-204ENST00000477429 IFNA21P01568 189 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 IFNA17P01571 189 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 ZNF705DP0CH99 300 aaPredicted RBP6.89□□□□□ -1.31
COL4A5-204ENST00000477429 ZNF705BP0CI00 300 aaPredicted RBP6.89□□□□□ -1.31
COL4A5-204ENST00000477429 HTN3P15516 51 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 MYL9P24844 172 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 CRYBB3P26998 211 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 ERVK-16P61578 105 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 ZNF600Q6ZNG1 722 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 PRSS48Q7RTY5 328 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 ZNF114Q8NC26 417 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 GRAMD2BQ96HH9 432 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 SEC22AQ96IW7 307 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 C18orf15Q96N68 181 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 AUNIPQ9H7T9 357 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 RHBDL2Q9NX52 303 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 TPRKBQ9Y3C4 175 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 FAT4Q6V0I7 4981 aa6.89□□□□□ -1.31
COL4A5-204ENST00000477429 H3BMM0 161 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 SNAPC5O75971 98 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 IGKV1-17P01599 117 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 PRM2P04554 102 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 EIF4EP06730 217 aaKnown RBP6.88□□□□□ -1.31
COL4A5-204ENST00000477429 PRCDQ00LT1 54 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 TIGITQ495A1 244 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 TMEM41BQ5BJD5 291 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 FAM222AQ5U5X8 452 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 TMEM88Q6PEY1 159 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 DHRS11Q6UWP2 260 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 CADM3Q8N126 398 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 OR5AP2Q8NGF4 316 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 TMEM56Q96MV1 263 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 GINS3Q9BRX5 216 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 TXNL4BQ9NX01 149 aaKnown RBP6.88□□□□□ -1.31
COL4A5-204ENST00000477429 DKK2Q9UBU2 259 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 PRNDQ9UKY0 176 aa6.88□□□□□ -1.31
COL4A5-204ENST00000477429 RRP15Q9Y3B9 282 aaKnown RBP6.88□□□□□ -1.31
COL4A5-204ENST00000477429 IGKV3-20P01619 116 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 PMP2P02689 132 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 RNASE2P10153 161 aaKnown RBP6.87□□□□□ -1.31
COL4A5-204ENST00000477429 NPPCP23582 126 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
COL4A5-204ENST00000477429 DHRS2Q13268 280 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 TBCEQ15813 527 aaPredicted RBP6.87□□□□□ -1.31
COL4A5-204ENST00000477429 RNF212Q495C1 297 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 PHLDA2Q53GA4 152 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 SFXN4Q6P4A7 337 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 ZNF367Q7RTV3 350 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 SPATA12Q7Z6I5 190 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 GLMPQ8WWB7 406 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 MOB3AQ96BX8 217 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 ZNF2Q9BSG1 426 aaPredicted RBP6.87□□□□□ -1.31
COL4A5-204ENST00000477429 YTHDF1Q9BYJ9 559 aaKnown RBP6.87□□□□□ -1.31
COL4A5-204ENST00000477429 KRTAP1-5Q9BYS1 174 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 EHFQ9NZC4 300 aa6.87□□□□□ -1.31
COL4A5-204ENST00000477429 IGHV3OR16-12A0A075B7B8 117 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 A0A0B4J293 547 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 FAM90A26D6RGX4 464 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 IGKV1-5P01602 117 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 CD5P06127 495 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 P0C879 139 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 SPART-AS1P0CW21 52 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 INAFM2P0DMQ5 153 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 NPY1RP25929 384 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 MXD1Q05195 221 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 C16orf54Q6UWD8 224 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 C1orf158Q8N1D5 194 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 CENPSQ8N2Z9 138 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 ZNF709Q8N972 641 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 ZNRF2Q8NHG8 242 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 MRGPRFQ96AM1 343 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 NEU1Q99519 415 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 ANAPC10Q9UM13 185 aa6.86□□□□□ -1.31
COL4A5-204ENST00000477429 A0A0G2JRQ6 117 aa6.85□□□□□ -1.31
COL4A5-204ENST00000477429 NBDYA0A0U1RRE5 68 aa6.85□□□□□ -1.31
COL4A5-204ENST00000477429 HELTA6NFD8 242 aa6.85□□□□□ -1.31
COL4A5-204ENST00000477429 ANKRD65E5RJM6 399 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms