RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RPL8P62917 257 aaKnown RBP12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 RNFT1Q5M7Z0 435 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 IGFL2Q6UWQ7 119 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 SPATA12Q7Z6I5 190 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 NHLRC2Q8NBF2 726 aa12.49□□□□□ -0.41
CLSTN1-205ENST00000477264 CORTO00230 105 aa12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 IGLC1P0CG04 106 aa12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 CEBPDP49716 269 aaPredicted RBP12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 HSPE1P61604 102 aaKnown RBP12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 GTF2H5Q6ZYL4 71 aa12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 S1PR3Q99500 378 aa12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 CLEC5AQ9NY25 188 aa12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 MSRB2Q9Y3D2 182 aa12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 DCHS1Q96JQ0 3298 aa12.48□□□□□ -0.41
CLSTN1-205ENST00000477264 LIPFP07098 398 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 CELA3AP09093 270 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 GDF5OSQ5U4N7 250 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 FAM53AQ6NSI3 398 aaPredicted RBP12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 OR2T6Q8NHC8 308 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 TMEM14BQ9NUH8 114 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 CEACAM4O75871 244 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 LEPROTL1O95214 131 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 CELA3BP08861 270 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 NBEAP1P0C6P0 100 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 ACP7Q6ZNF0 438 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 OR13A1Q8NGR1 328 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 SNRNP40Q96DI7 357 aaKnown RBP12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 MEGF9Q9H1U4 602 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
CLSTN1-205ENST00000477264 IGHV3-43A0A0B4J1X8 118 aa12.46□□□□□ -0.41
CLSTN1-205ENST00000477264 TRAV17A0A0B4J275 112 aa12.46□□□□□ -0.41
CLSTN1-205ENST00000477264 IGHV3-43DP0DP04 118 aa12.46□□□□□ -0.41
CLSTN1-205ENST00000477264 HBBP68871 147 aa12.46□□□□□ -0.41
CLSTN1-205ENST00000477264 ST6GALNAC6Q969X2 333 aa12.46□□□□□ -0.41
CLSTN1-205ENST00000477264 MAP1LC3CQ9BXW4 147 aa12.46□□□□□ -0.41
CLSTN1-205ENST00000477264 ZNF355PQ9NSJ1 428 aa12.46□□□□□ -0.41
CLSTN1-205ENST00000477264 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.42
CLSTN1-205ENST00000477264 MDP1Q86V88 176 aa12.46□□□□□ -0.42
CLSTN1-205ENST00000477264 ZADH2Q8N4Q0 377 aa12.46□□□□□ -0.42
CLSTN1-205ENST00000477264 KIR3DL3Q8N743 410 aa12.46□□□□□ -0.42
CLSTN1-205ENST00000477264 URB1-AS1Q96HZ7 61 aa12.46□□□□□ -0.42
CLSTN1-205ENST00000477264 CA1P00915 261 aaPredicted RBP12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 GRPP07492 148 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 APOBEC3AP31941 199 aaPredicted RBP12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 LINC00205P59089 165 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 SRYQ05066 204 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 SMIM21Q3B7S5 101 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 CT83Q5H943 113 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 SSBP3Q9BWW4 388 aaPredicted RBP12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 HSPB8Q9UJY1 196 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 TRAV3A0A0B4J244 114 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 hDV102S1A0JD36 115 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 NDUFS8O00217 210 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 GPR183P32249 361 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 UBE2L3P68036 154 aaKnown RBP12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 FAM168AQ92567 244 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 DEFB127Q9H1M4 99 aa12.45□□□□□ -0.42
CLSTN1-205ENST00000477264 LOC400499M0QZD8 3231 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 PEX7O00628 323 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 PROP1O75360 226 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 CEACAM3P40198 252 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 PAX2Q02962 417 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 ERASQ7Z444 233 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 DDB2Q92466 427 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 DPF1Q92782 380 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 IDI2-AS1Q9NZ38 188 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 PRNDQ9UKY0 176 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 ZNF835Q9Y2P0 537 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 ZNF257Q9Y2Q1 563 aa12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 AMMECR1Q9Y4X0 333 aaPredicted RBP12.44□□□□□ -0.42
CLSTN1-205ENST00000477264 GAGE10A6NGK3 116 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 DEFB108AA8MXU0 73 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 POU2AF1Q16633 256 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 FAM90A1Q86YD7 464 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 FER1L6-AS1Q8NA97 138 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 H1FXQ92522 213 aaKnown RBP12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 ZNF714Q96N38 554 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 CXXC4Q9H2H0 198 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 CFAP47Q6ZTR5 3102 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 TRGV5A0A0B4J1U4 118 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 C7orf71A4D174 169 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 COX8AP10176 69 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 C7orf69Q9H7B7 122 aa12.43□□□□□ -0.42
CLSTN1-205ENST00000477264 G3V4G9 280 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 GATA2P23769 480 aaPredicted RBP12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 GPR6P46095 362 aaPredicted RBP12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 IGFL3Q6UXB1 125 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 Q6ZR03 302 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 SSX8Q7RTT4 187 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 BPIFA4PQ86YQ2 179 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 VKORC1L1Q8N0U8 176 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 ADTRPQ96IZ2 230 aa12.42□□□□□ -0.42
CLSTN1-205ENST00000477264 AP1S3Q96PC3 154 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms