RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 LGALS14Q8TCE9 139 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 DDIT4LQ96D03 193 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 ZHX1-C8orf76Q96EF9 292 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 PYURFQ96I23 114 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 PAIP2Q9BPZ3 127 aaKnown RBP2.09□□□□□ -2.07
PTCD3-211ENST00000476215 CENPHQ9H3R5 247 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 CBLN4Q9NTU7 201 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 FAIMQ9NVQ4 179 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 EMC3Q9P0I2 261 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 U3KQK5 164 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 V9GYY5 206 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-211ENST00000476215 A0A096LNT2 108 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 LOC102725191A0A1B0GVB3 256 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 A0A1W2PNM2 257 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 PGPA6NDG6 321 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 FTCDNL1E5RQL4 147 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 M0QXV9 152 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 UBDO15205 165 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 IDO1P14902 403 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 CNTFRP26992 372 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 NUP62P37198 522 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-211ENST00000476215 CRATP43155 626 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 POLR2JP52435 117 aaKnown RBP2.08□□□□□ -2.08
PTCD3-211ENST00000476215 EFNA4P52798 201 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 COPZ1P61923 177 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 HPCAP84074 193 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 HOXC5Q00444 222 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 DMTNQ08495 405 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 VAMP3Q15836 100 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 C1orf140Q5VVS0 124 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 AAED1Q7RTV5 226 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 MUC15Q8N387 334 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 C17orf78Q8N4C9 275 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 MFSD8Q8NHS3 518 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 C10orf105Q8TEF2 133 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 GTF2H4Q92759 462 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 MAL2Q969L2 176 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 SLC35B4Q969S0 331 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 OR52B2Q96RD2 323 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 APOL4Q9BPW4 351 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 HINT2Q9BX68 163 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 TPT1P8Q9HAU6 139 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 BCL2L10Q9HD36 194 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 CALML5Q9NZT1 146 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 MEGF8Q7Z7M0 2845 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 MGAM2Q2M2H8 2515 aa2.08□□□□□ -2.08
PTCD3-211ENST00000476215 CMYA5Q8N3K9 4069 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 IGKV1D-42A0A075B6H8 117 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TRAV36DV7A0A075B6V5 113 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 A0A096LPI6 279 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TRAV8-3A0A0A6YYJ7 113 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 IGHV1-18A0A0C4DH31 117 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 A0A1B0GU33 70 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 A0A1B0GWA3 101 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 C5orf58C9J3I9 102 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 ATP6V1G2-DDX39BF2Z307 99 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 PLPP3O14495 311 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 ZNF73O43830 326 aaPredicted RBP2.07□□□□□ -2.08
PTCD3-211ENST00000476215 OR2T1O43869 369 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TPST1O60507 370 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 DEDDO75618 318 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 LY6HO94772 140 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 OR4A8P0C604 315 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 CBR1P16152 277 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 SLC25A16P16260 332 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 GRPRP30550 384 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 EVX1P49640 407 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 IDH3GP51553 393 aaPredicted RBP2.07□□□□□ -2.08
PTCD3-211ENST00000476215 AQP5P55064 265 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 MAGOHP61326 146 aaKnown RBP2.07□□□□□ -2.08
PTCD3-211ENST00000476215 CDK6Q00534 326 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 FADDQ13158 208 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 C1DQ13901 141 aaKnown RBP2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TMEM249Q2WGJ8 235 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 LIN52Q52LA3 116 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 C6orf52Q5T4I8 152 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 DHRS4L2Q6PKH6 230 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TCF24Q7RTU0 167 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 FUNDC1Q8IVP5 155 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 MSRB3Q8IXL7 192 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 C20orf196Q8IYI0 205 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 Q8NAQ8 132 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TLCD1Q96CP7 247 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 WFDC6Q9BQY6 131 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TAPBPLQ9BX59 468 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 LINC00470Q9BZP3 86 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TMBIM4Q9HC24 238 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 NKIRAS1Q9NYS0 192 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 GMEB1Q9Y692 573 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 ARFGEF3Q5TH69 2177 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 DSPPQ9NZW4 1301 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 TGP01266 2768 aa2.07□□□□□ -2.08
PTCD3-211ENST00000476215 YLPM1P49750 1951 aaKnown RBP2.07□□□□□ -2.08
PTCD3-211ENST00000476215 MALRD1Q5VYJ5 2156 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 A0A087WUJ7 227 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 PRORSD1PA6NEY8 169 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 EVPLLA8MZ36 301 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 LYNX1G3V0Z9 82 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 hCG_2039718K7EN88 272 aa2.06□□□□□ -2.08
PTCD3-211ENST00000476215 M0QX08 132 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms