RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 K7EN84 100 aa13.4□□□□□ -0.26
TVP23B-202ENST00000476139 COX7A1P24310 79 aa13.4□□□□□ -0.26
TVP23B-202ENST00000476139 RUSC1-AS1Q66K80 236 aa13.4□□□□□ -0.26
TVP23B-202ENST00000476139 FAM71F2Q6NXP2 309 aa13.4□□□□□ -0.26
TVP23B-202ENST00000476139 VSTM2AQ8TAG5 236 aa13.4□□□□□ -0.26
TVP23B-202ENST00000476139 ZNF503Q96F45 646 aa13.4□□□□□ -0.26
TVP23B-202ENST00000476139 PPIAL4CA0A0B4J2A2 164 aa13.39□□□□□ -0.27
TVP23B-202ENST00000476139 IGLV1-47P01700 117 aa13.39□□□□□ -0.27
TVP23B-202ENST00000476139 PPIAL4GP0DN37 164 aa13.39□□□□□ -0.27
TVP23B-202ENST00000476139 CD33P20138 364 aa13.39□□□□□ -0.27
TVP23B-202ENST00000476139 MORN5Q5VZ52 161 aa13.39□□□□□ -0.27
TVP23B-202ENST00000476139 MRPL41Q8IXM3 137 aaKnown RBP13.39□□□□□ -0.27
TVP23B-202ENST00000476139 C14orf144Q96I85 54 aa13.39□□□□□ -0.27
TVP23B-202ENST00000476139 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
TVP23B-202ENST00000476139 CNN1P51911 297 aaKnown RBP13.39□□□□□ -0.27
TVP23B-202ENST00000476139 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
TVP23B-202ENST00000476139 A0A1W2PPI3 338 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 DLL1O00548 723 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 CBLN1P23435 193 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 CRYBB3P26998 211 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 MC5RP33032 325 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 LGALS4P56470 323 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 JOSD1Q15040 202 aaPredicted RBP13.38□□□□□ -0.27
TVP23B-202ENST00000476139 HCP5Q6MZN7 132 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 TEX38Q6PEX7 206 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 OR7C2O60412 319 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 RPL15P61313 204 aaKnown RBP13.38□□□□□ -0.27
TVP23B-202ENST00000476139 ZNF90Q03938 601 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 LY6DQ14210 128 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 NPIPB3Q92617 1050 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 INSIG2Q9Y5U4 225 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 OR4A5Q8NH83 315 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 IGFBPL1Q8WX77 278 aa13.38□□□□□ -0.27
TVP23B-202ENST00000476139 TRAV5A0A0B4J249 113 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 BUB1B-PAK6H3BSN5 160 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 DDTP30046 118 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 SLC35B1P78383 322 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 VMA21Q3ZAQ7 101 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 SLC35E1Q96K37 410 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 A0A1W2PN81 502 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 TYMSP04818 313 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 ADMP35318 185 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 ATP5IP56385 69 aaPredicted RBP13.37□□□□□ -0.27
TVP23B-202ENST00000476139 ZNF664Q8N3J9 261 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
TVP23B-202ENST00000476139 IGHV1-3A0A0C4DH29 117 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 TSTD3H0UI37 97 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 PKIAP61925 76 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 LHFPL4Q7Z7J7 247 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 AREGP15514 252 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 LGALS7P47929 136 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 PRRX1P54821 245 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 LDLRAD2Q5SZI1 272 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 UHRF2Q96PU4 802 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 CLEC7AQ9BXN2 247 aa13.36□□□□□ -0.27
TVP23B-202ENST00000476139 ZMAT5Q9UDW3 170 aaKnown RBP13.36□□□□□ -0.27
TVP23B-202ENST00000476139 INS-IGF2F8WCM5 200 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 ERVFC1-1P60608 527 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 LCN2P80188 198 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 COA6Q5JTJ3 125 aaKnown RBP13.35□□□□□ -0.27
TVP23B-202ENST00000476139 ONECUT1Q9UBC0 465 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 MED13LQ71F56 2210 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 IGHV3-21A0A0B4J1V1 117 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 C22orf46C9J442 243 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 MT-CO2P00403 227 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 SUMO1P63165 101 aaKnown RBP13.35□□□□□ -0.27
TVP23B-202ENST00000476139 FOXL1Q12952 345 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 FXYD3Q14802 87 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 TNXAQ16473 311 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 TXNDC17Q9BRA2 123 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 MFAP2P55001 183 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 PQLC2Q6ZP29 291 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 PNKDQ8N490 385 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 NHLRC2Q8NBF2 726 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 TMEM18Q96B42 140 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 SLC25A33Q9BSK2 321 aa13.35□□□□□ -0.27
TVP23B-202ENST00000476139 RNASE7Q9H1E1 156 aaKnown RBP13.35□□□□□ -0.27
TVP23B-202ENST00000476139 TECRQ9NZ01 308 aaKnown RBP13.35□□□□□ -0.27
TVP23B-202ENST00000476139 HIVEP3Q5T1R4 2406 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 IGLC7A0M8Q6 106 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 CD99P14209 185 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 TCL1AP56279 114 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 ARF6P62330 175 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 VPS13CQ709C8 3753 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 IGKV1D-37A0A075B6S9 117 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 PSMB11A5LHX3 300 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 OR5G3P0C626 314 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 PDLIM4P50479 330 aa13.34□□□□□ -0.27
TVP23B-202ENST00000476139 EAF1Q96JC9 268 aaPredicted RBP13.34□□□□□ -0.27
TVP23B-202ENST00000476139 HELTA6NFD8 242 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 FCN1O00602 326 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 SCGB1D1O95968 90 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 IER3P46695 156 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 CENPWQ5EE01 88 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 OR8B3Q8NGG8 313 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 RNASEH2CQ8TDP1 164 aaKnown RBP13.33□□□□□ -0.28
TVP23B-202ENST00000476139 MISP3Q96FF7 219 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 OR8B2Q96RD0 313 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 SIGLEC9Q9Y336 463 aa13.33□□□□□ -0.28
TVP23B-202ENST00000476139 GATCO43716 136 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms