RNA–Protein interactions for RNA: ENST00000475965.1

HDAC10-210, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,239 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-210ENST00000475965 SNX29P2Q8IUI4 249 aa13.24□□□□□ -0.29
HDAC10-210ENST00000475965 GRAMD2BQ96HH9 432 aa13.24□□□□□ -0.29
HDAC10-210ENST00000475965 PDCD10Q9BUL8 212 aa13.24□□□□□ -0.29
HDAC10-210ENST00000475965 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
HDAC10-210ENST00000475965 K7EQG2 157 aa13.23□□□□□ -0.29
HDAC10-210ENST00000475965 APOA1P02647 267 aa13.23□□□□□ -0.29
HDAC10-210ENST00000475965 RBMY1A1P0DJD3 496 aaKnown RBP13.23□□□□□ -0.29
HDAC10-210ENST00000475965 RBMY1CP0DJD4 496 aa13.23□□□□□ -0.29
HDAC10-210ENST00000475965 RNASE2P10153 161 aaKnown RBP13.23□□□□□ -0.29
HDAC10-210ENST00000475965 PGAM2P15259 253 aa13.23□□□□□ -0.29
HDAC10-210ENST00000475965 HLA-DMBP28068 263 aa13.23□□□□□ -0.29
HDAC10-210ENST00000475965 RBMY1FQ15415 496 aaKnown RBP13.23□□□□□ -0.29
HDAC10-210ENST00000475965 CENPSQ8N2Z9 138 aa13.23□□□□□ -0.29
HDAC10-210ENST00000475965 YIPF6Q96EC8 236 aa13.23□□□□□ -0.29
HDAC10-210ENST00000475965 ZNF486Q96H40 463 aaPredicted RBP13.23□□□□□ -0.29
HDAC10-210ENST00000475965 NARS2Q96I59 477 aaKnown RBP13.23□□□□□ -0.29
HDAC10-210ENST00000475965 TRAV10A0A0B4J240 114 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 A0A0B4J293 547 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 M0QYG6 137 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 CLN5O75503 358 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 ATG12O94817 140 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 ZNF688P0C7X2 276 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 P0C879 139 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 C4BPBP20851 252 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 CRYBB3P26998 211 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 OPRK1P41145 380 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 P2RY1P47900 373 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 HOXA1P49639 335 aaPredicted RBP13.22□□□□□ -0.29
HDAC10-210ENST00000475965 Q6ZTC4 211 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 TMEM230Q96A57 120 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 TP53RKQ96S44 253 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 ENY2Q9NPA8 101 aa13.22□□□□□ -0.29
HDAC10-210ENST00000475965 KNCNA6PVL3 124 aa13.21□□□□□ -0.29
HDAC10-210ENST00000475965 ZNF705EA8MWA4 302 aaPredicted RBP13.21□□□□□ -0.29
HDAC10-210ENST00000475965 PI3P19957 117 aa13.21□□□□□ -0.29
HDAC10-210ENST00000475965 PPP5CP53041 499 aa13.21□□□□□ -0.29
HDAC10-210ENST00000475965 PIGPP57054 158 aa13.21□□□□□ -0.29
HDAC10-210ENST00000475965 OR4X1Q8NH49 305 aa13.21□□□□□ -0.29
HDAC10-210ENST00000475965 FNDC4Q9H6D8 234 aaPredicted RBP13.21□□□□□ -0.29
HDAC10-210ENST00000475965 VCX3AQ9NNX9 186 aa13.21□□□□□ -0.29
HDAC10-210ENST00000475965 MRPL36Q9P0J6 103 aaKnown RBP13.21□□□□□ -0.29
HDAC10-210ENST00000475965 IGHV4-4A0A075B6R2 117 aa13.2□□□□□ -0.3
HDAC10-210ENST00000475965 ETV6P41212 452 aa13.2□□□□□ -0.3
HDAC10-210ENST00000475965 EIF2B2P49770 351 aaKnown RBP13.2□□□□□ -0.3
HDAC10-210ENST00000475965 ACTL10Q5JWF8 245 aa13.2□□□□□ -0.3
HDAC10-210ENST00000475965 DCANP1Q8TF63 244 aa13.2□□□□□ -0.3
HDAC10-210ENST00000475965 X6R8D5 127 aa13.2□□□□□ -0.3
HDAC10-210ENST00000475965 RYR1P21817 5038 aa13.19□□□□□ -0.3
HDAC10-210ENST00000475965 C3orf85A0A1B0GTC6 90 aa13.19□□□□□ -0.3
HDAC10-210ENST00000475965 RPL5P46777 297 aaKnown RBP13.19□□□□□ -0.3
HDAC10-210ENST00000475965 TRIM16LQ309B1 348 aa13.19□□□□□ -0.3
HDAC10-210ENST00000475965 RNASE10Q5GAN6 216 aaKnown RBP13.19□□□□□ -0.3
HDAC10-210ENST00000475965 LINC00336Q6ZUF6 198 aa13.19□□□□□ -0.3
HDAC10-210ENST00000475965 LHFPL1Q86WI0 220 aa13.19□□□□□ -0.3
HDAC10-210ENST00000475965 TBC1D24Q9ULP9 559 aa13.19□□□□□ -0.3
HDAC10-210ENST00000475965 TRAV30A0A087WSZ9 112 aa13.18□□□□□ -0.3
HDAC10-210ENST00000475965 ELOA3CA0A087WX78 387 aaPredicted RBP13.18□□□□□ -0.3
HDAC10-210ENST00000475965 IGKV1-17P01599 117 aa13.18□□□□□ -0.3
HDAC10-210ENST00000475965 ELK1P19419 428 aa13.18□□□□□ -0.3
HDAC10-210ENST00000475965 DHRS2Q13268 280 aa13.18□□□□□ -0.3
HDAC10-210ENST00000475965 TIGITQ495A1 244 aa13.18□□□□□ -0.3
HDAC10-210ENST00000475965 ARRDC1Q8N5I2 433 aa13.18□□□□□ -0.3
HDAC10-210ENST00000475965 RNASE11Q8TAA1 199 aaKnown RBP13.18□□□□□ -0.3
HDAC10-210ENST00000475965 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
HDAC10-210ENST00000475965 RNF126Q9BV68 326 aa13.18□□□□□ -0.3
HDAC10-210ENST00000475965 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
HDAC10-210ENST00000475965 RPS10-NUDT3A0A1W2PQS6 291 aa13.17□□□□□ -0.3
HDAC10-210ENST00000475965 HELTA6NFD8 242 aa13.17□□□□□ -0.3
HDAC10-210ENST00000475965 HPGDSO60760 199 aa13.17□□□□□ -0.3
HDAC10-210ENST00000475965 MLANAQ16655 118 aa13.17□□□□□ -0.3
HDAC10-210ENST00000475965 BSXQ3C1V8 233 aa13.17□□□□□ -0.3
HDAC10-210ENST00000475965 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
HDAC10-210ENST00000475965 CCDC71LQ8N9Z2 235 aa13.17□□□□□ -0.3
HDAC10-210ENST00000475965 CSNK1G2-AS1Q8NCQ2 148 aa13.17□□□□□ -0.3
HDAC10-210ENST00000475965 COPZ2Q9P299 210 aa13.17□□□□□ -0.3
HDAC10-210ENST00000475965 A0A087WXM4 84 aa13.16□□□□□ -0.3
HDAC10-210ENST00000475965 NCS1P62166 190 aa13.16□□□□□ -0.3
HDAC10-210ENST00000475965 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
HDAC10-210ENST00000475965 KLK11Q9UBX7 282 aa13.16□□□□□ -0.3
HDAC10-210ENST00000475965 CELA1Q9UNI1 258 aa13.16□□□□□ -0.3
HDAC10-210ENST00000475965 PKD1P98161 4303 aa13.16□□□□□ -0.3
HDAC10-210ENST00000475965 A0A0G2JRQ6 117 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 AMBPP02760 352 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 CD3DP04234 171 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 HNRNPCP07910 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDAC10-210ENST00000475965 TBPP20226 339 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 UCP1P25874 307 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 HTR2BP41595 481 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
HDAC10-210ENST00000475965 SPCS3P61009 180 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 SP6Q3SY56 376 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 OR1S2Q8NGQ3 325 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 ZFAND1Q8TCF1 268 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 GLMPQ8WWB7 406 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 RAB40CQ96S21 281 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 C1QTNF4Q9BXJ3 329 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 U3KQE9 123 aa13.15□□□□□ -0.3
HDAC10-210ENST00000475965 DYNC1H1Q14204 4646 aaKnown RBP13.15□□□□□ -0.3
HDAC10-210ENST00000475965 DEFB131BA0A096LNP1 70 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms