RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CTDSP2O14595 271 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 DEDDO75618 318 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 GABARAPO95166 117 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 CDS2O95674 445 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 IGKV1-17P01599 117 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 ZNF182P17025 639 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-207ENST00000475549 UCP1P25874 307 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 S100GP29377 79 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 SNCAP37840 140 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 DEFB131AP59861 70 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 RNASE10Q5GAN6 216 aaKnown RBP5.12□□□□□ -1.59
HDAC3-207ENST00000475549 FAAP20Q6NZ36 180 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 ZNF600Q6ZNG1 722 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 ARRDC1Q8N5I2 433 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 OR11H2Q8NH07 326 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 MARCH1Q8TCQ1 289 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 GLYATL2Q8WU03 294 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 GATAD1Q8WUU5 269 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 PHLDA1Q8WV24 401 aaPredicted RBP5.12□□□□□ -1.59
HDAC3-207ENST00000475549 TMEM170AQ8WVE7 144 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 RARRES2Q99969 163 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 VCX3AQ9NNX9 186 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 EXTL2Q9UBQ6 330 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 CLN5O75503 358 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 NXPH3O95157 252 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 IFNA17P01571 189 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 OR5AC1P0C628 307 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 TBPP20226 339 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 NPPCP23582 126 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 CRYBB3P26998 211 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 RPL5P46777 297 aaKnown RBP5.11□□□□□ -1.59
HDAC3-207ENST00000475549 NPBWR1P48145 328 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 CMC4P56277 68 aaPredicted RBP5.11□□□□□ -1.59
HDAC3-207ENST00000475549 SPCS2Q15005 226 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 RBMS2Q15434 407 aaKnown RBP5.11□□□□□ -1.59
HDAC3-207ENST00000475549 TIGITQ495A1 244 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 GPR107Q5VW38 600 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 MZT2AQ6P582 158 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 SLC35G3Q8N808 338 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 TMEM229BQ8NBD8 167 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 OR4X1Q8NH49 305 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 DCANP1Q8TF63 244 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 GPR146Q96CH1 333 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 TMEM222Q9H0R3 208 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 U3KQE9 123 aa5.11□□□□□ -1.59
HDAC3-207ENST00000475549 TRAV2A0A0B4J234 112 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 KNCNA6PVL3 124 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 GABARAPH6UMI1 98 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 K7EQG2 157 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 DNASE2O00115 360 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 RAB3DO95716 219 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 CA1P00915 261 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 CD5P06127 495 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 IGLC1P0CG04 106 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 RBMY1A1P0DJD3 496 aaKnown RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 RBMY1CP0DJD4 496 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 OPRK1P41145 380 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 HOXA1P49639 335 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 AKR1C2P52895 323 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 RPL11P62913 178 aaKnown RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 MEF2DQ14814 521 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 RBMY1FQ15415 496 aaKnown RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 TRIM16LQ309B1 348 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 SCGB2B2Q4G0G5 96 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 LGALS9CQ6DKI2 356 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 STEAP1BQ6NZ63 245 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 PRSS54Q6PEW0 395 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 TRPT1Q86TN4 253 aaKnown RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 SELENOHQ8IZQ5 122 aaKnown RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 TMEM217Q8N7C4 229 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 OR52E5Q8NH55 327 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 C11orf45Q8TAV5 145 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 ZFAND1Q8TCF1 268 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 AP3S1Q92572 193 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 GINS3Q9BRX5 216 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 C6orf62Q9GZU0 229 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 C11orf68Q9H3H3 251 aaKnown RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 PRR13Q9NZ81 148 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 COPZ2Q9P299 210 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 GPR132Q9UNW8 380 aa5.1□□□□□ -1.59
HDAC3-207ENST00000475549 KLK5Q9Y337 293 aaPredicted RBP5.1□□□□□ -1.59
HDAC3-207ENST00000475549 VPS13DQ5THJ4 4388 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 ELOA3CA0A087WX78 387 aaPredicted RBP5.09□□□□□ -1.59
HDAC3-207ENST00000475549 TEX13DA0A0J9YY54 714 aaPredicted RBP5.09□□□□□ -1.59
HDAC3-207ENST00000475549 C4BPBP20851 252 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 P2RY1P47900 373 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 ALDH3B2P48448 385 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 SUB1P53999 127 aaKnown RBP eCLIP5.09□□□□□ -1.59
HDAC3-207ENST00000475549 TAS2R19P59542 299 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 SPCS3P61009 180 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 PAFAH1B2P68402 229 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 TMEM187Q14656 261 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 NMSQ5H8A3 153 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 Q8NAQ8 132 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 TMEM230Q96A57 120 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 RRNAD1Q96FB5 475 aaKnown RBP5.09□□□□□ -1.59
HDAC3-207ENST00000475549 NAA60Q9H7X0 242 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms