RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 MYOD1P15172 320 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 FXYD3Q14802 87 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 RPL7L1Q6DKI1 246 aaKnown RBP12.18□□□□□ -0.46
CPSF3-203ENST00000475482 TEX38Q6PEX7 206 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 C18orf65Q6ZTR6 163 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 ZNF680Q8NEM1 530 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 OR1L6Q8NGR2 347 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 RCC1LQ96I51 464 aaKnown RBP12.18□□□□□ -0.46
CPSF3-203ENST00000475482 TMEM147Q9BVK8 224 aa12.18□□□□□ -0.46
CPSF3-203ENST00000475482 CORTO00230 105 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 ELANEP08246 267 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 BSXQ3C1V8 233 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 KHDC1LQ5JSQ8 128 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 C10orf55Q5SWW7 151 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 OR10W1Q8NGF6 305 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 ABHD5Q8WTS1 349 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 SCARB1Q8WTV0 552 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 ARPC1AQ92747 370 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 GNPNAT1Q96EK6 184 aaPredicted RBP12.17□□□□□ -0.46
CPSF3-203ENST00000475482 P2RX4Q99571 388 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
CPSF3-203ENST00000475482 UQCC1Q9NVA1 299 aa12.17□□□□□ -0.46
CPSF3-203ENST00000475482 PMS2P5A8MQ11 134 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 FNDC10F2Z333 226 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 FCN1O00602 326 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 IGHG4P01861 327 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 MYCNOSP40205 109 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 RAB14P61106 215 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 DLK1P80370 383 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 FOXE3Q13461 319 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 EXOSC2Q13868 293 aaKnown RBP12.16□□□□□ -0.46
CPSF3-203ENST00000475482 RNASEH2CQ8TDP1 164 aaKnown RBP12.16□□□□□ -0.46
CPSF3-203ENST00000475482 BSCL2Q96G97 398 aaPredicted RBP12.16□□□□□ -0.46
CPSF3-203ENST00000475482 TMEM68Q96MH6 324 aa12.16□□□□□ -0.46
CPSF3-203ENST00000475482 AURKAIP1Q9NWT8 199 aaPredicted RBP12.16□□□□□ -0.46
CPSF3-203ENST00000475482 IGLC7A0M8Q6 106 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 CGB1A6NKQ9 187 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
CPSF3-203ENST00000475482 PPIFP30405 207 aaKnown RBP12.15□□□□□ -0.46
CPSF3-203ENST00000475482 CDX1P47902 265 aaPredicted RBP12.15□□□□□ -0.46
CPSF3-203ENST00000475482 CX3CL1P78423 397 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 WT1-ASQ06250 92 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 EGFEM1PQ0D2K5 195 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 ETFRF1Q6IPR1 90 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 C8orf86Q6ZUL3 223 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 LRRC20Q8TCA0 184 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 MYOZ3Q8TDC0 251 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 GINS3Q9BRX5 216 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 ARV1Q9H2C2 271 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 WFDC1Q9HC57 220 aa12.15□□□□□ -0.46
CPSF3-203ENST00000475482 IGHV7-81A0A0B4J1V7 117 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 RPS10-NUDT3A0A1W2PQS6 291 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 TEX22C9J3V5 150 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 E7EUB6 86 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 MPDU1O75352 247 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 RPLP1P05386 114 aaKnown RBP12.14□□□□□ -0.47
CPSF3-203ENST00000475482 SEC11BP0C7V7 166 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 PSMB8P28062 276 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 GPX4P36969 197 aaPredicted RBP12.14□□□□□ -0.47
CPSF3-203ENST00000475482 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 HAPLN4Q86UW8 402 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 KLHL30-AS1Q8NEE0 82 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 OR1P1Q8NH06 330 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 CACNG8Q8WXS5 425 aa12.14□□□□□ -0.47
CPSF3-203ENST00000475482 CFDP00746 253 aaPredicted RBP12.13□□□□□ -0.47
CPSF3-203ENST00000475482 DEFA4P12838 97 aa12.13□□□□□ -0.47
CPSF3-203ENST00000475482 CRIP2P52943 208 aaPredicted RBP12.13□□□□□ -0.47
CPSF3-203ENST00000475482 RAB31Q13636 194 aa12.13□□□□□ -0.47
CPSF3-203ENST00000475482 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
CPSF3-203ENST00000475482 ALKAL2Q6UX46 152 aa12.13□□□□□ -0.47
CPSF3-203ENST00000475482 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
CPSF3-203ENST00000475482 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
CPSF3-203ENST00000475482 NPVFQ9HCQ7 196 aa12.13□□□□□ -0.47
CPSF3-203ENST00000475482 F11RQ9Y624 299 aaKnown RBP12.13□□□□□ -0.47
CPSF3-203ENST00000475482 TNCP24821 2201 aa12.13□□□□□ -0.47
CPSF3-203ENST00000475482 UBE2L5PA0A1B0GUS4 154 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 A0A1B0GW64 132 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 NPIPB5A8MRT5 1133 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 C17orf112F2Z3M2 114 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 SOX15O60248 233 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 IGLV1-40P01703 118 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 SPP1P10451 314 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 RAB5CP51148 216 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 KRTAP10-11P60412 298 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 SSBP2P81877 361 aaPredicted RBP12.12□□□□□ -0.47
CPSF3-203ENST00000475482 C19orf54Q5BKX5 351 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 ZNF709Q8N972 641 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 HSD17B11Q8NBQ5 300 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 RNF141Q8WVD5 230 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 SLC35E1Q96K37 410 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
CPSF3-203ENST00000475482 SLC25A32Q9H2D1 315 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 KCNIP2Q9NS61 270 aa12.12□□□□□ -0.47
CPSF3-203ENST00000475482 SMCO3A2RU48 225 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 NUDT19A8MXV4 375 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 PRSS46E5RG02 174 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 CCL24O00175 119 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms