RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 GAPDHP04406 335 aaKnown RBP9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 VSIG8P0DPA2 414 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 TGFBR1P36897 503 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 F2RL1P55085 397 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 LOXL3P58215 753 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 ZNF816Q0VGE8 651 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 ABCA11PQ4W5N1 156 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 DHRS11Q6UWP2 260 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 TOMM20LQ6UXN7 152 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 OR56B4Q8NH76 319 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 FAM110DQ8TAY7 271 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 WIPF2Q8TF74 440 aaPredicted RBP9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 GPR82Q96P67 336 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 MGLLQ99685 303 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 TMEM59Q9BXS4 323 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 SPANXCQ9NY87 97 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 KCNIP1Q9NZI2 227 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 GNG12Q9UBI6 72 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 MOB4Q9Y3A3 225 aa9.16□□□□□ -0.94
HLA-DOB-208ENST00000475235 RS1O15537 224 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 SNRPBP14678 240 aaKnown RBP9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 HES1Q14469 280 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 ZNF345Q14585 488 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 Q6ZS46 218 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 FA2HQ7L5A8 372 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 NDUFA11Q86Y39 141 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 CMTM1Q8IZ96 169 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 DRAM1Q8N682 238 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 LGALS14Q8TCE9 139 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 TM2D1Q9BX74 207 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 ARL6Q9H0F7 186 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 TAF9BQ9HBM6 251 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 MBNL3Q9NUK0 354 aaKnown RBP9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 SS18L2Q9UHA2 77 aa9.15□□□□□ -0.94
HLA-DOB-208ENST00000475235 IGHV3-43A0A0B4J1X8 118 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 UBE2QL1A1L167 161 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 PSMB11A5LHX3 300 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 TMEM14DPA8MWL7 114 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 E5RGE8 158 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BKO60814 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HBZP02008 142 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 MBPP02686 304 aaPredicted RBP9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BJP06899 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 IGHV3-43DP0DP04 118 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 CD28P10747 220 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BOP23527 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BBP33778 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 TCTAP57738 103 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BDP58876 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BCP62807 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 RPS25P62851 125 aaKnown RBP9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST2H2BEQ16778 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 TMEM91Q6ZNR0 172 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 TCTEX1D1Q8N7M0 179 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR5AP2Q8NGF4 316 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 UBALD1Q8TB05 177 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BHQ93079 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 DIRAS2Q96HU8 199 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BNQ99877 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H2BMQ99879 126 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 BET1LQ9NYM9 111 aa9.15□□□□□ -0.95
HLA-DOB-208ENST00000475235 DSCAML1Q8TD84 2053 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 MEGF8Q7Z7M0 2845 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 PKD1L1Q8TDX9 2849 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 IGHV1-3A0A0C4DH29 117 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 SMIM9A6NGZ8 99 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 SLC17A2O00624 439 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 IGKV1D-33P01593 117 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 IGKV1-33P01594 117 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 AMY1AP04745 511 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 AMY2AP04746 511 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 RLN1P04808 185 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 CXCL3P19876 107 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 ZNF137PP52743 207 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 EBI3Q14213 229 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 DIAPH2-AS1Q14236 149 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 SLC25A48Q6ZT89 311 aaKnown RBP9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 MOB3BQ86TA1 216 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR4F17Q8NGA8 305 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR5AU1Q8NGC0 362 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR4X2Q8NGF9 303 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR1L1Q8NH94 360 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 MRPL30Q8TCC3 161 aaKnown RBP9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 RNF141Q8WVD5 230 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 NUDCD2Q8WVJ2 157 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 RTN4IP1Q8WWV3 396 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR4F4Q96R69 305 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 TMEM231Q9H6L2 316 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 RPS10P5Q9NQ39 176 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 CACFD1Q9UGQ2 172 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 GPR132Q9UNW8 380 aa9.14□□□□□ -0.95
HLA-DOB-208ENST00000475235 ZNF705GA8MUZ8 300 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 REG1BP48304 166 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 TAS2R30P59541 319 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 QRFPP83859 136 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 UNC119Q13432 240 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 IAH1Q2TAA2 248 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 NSUN5P1Q3KNT7 163 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms